| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0567 |
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| Symbol | |
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| ID | 3908260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 639289 |
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| End bp | 641274 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882456 |
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| Product | OmpA-like transmembrane domain-containing protein |
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| Protein accession | YP_484189 |
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| Protein GI | 86747693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.284083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATC CGCGACGCTG CGCCACCATG CGCCCAATCG TGACGACCGC GCTGATGCTC
GGCGGCCTGG TGCTGCCGCA GGCCGCGTCC GCGGCCGACG CACTGAAGGC ATTGCCGAGC
CCGGCCATGG ACTGGAGCGG CTTCTATGTC GGCGCCCATG CCGGCTATGT CCGCGGCCAC
GCCGATGCGC GCCTGCAGGA TCCGACGTTC GCGGCGAGCC AGAGCAGCGG CTCCGGCGGC
GTCACCGCCG GCGCGCAGGC GGGCTACAAT ATTCTGACGC GCGCGGGCGT GCTGTTCGGC
GTCGAGGCCG ACATCTCGTT TCCGAGCTAT CTGCCGGCCA ATGCGGTGCT GTCGGAGTTC
GACAACGCAA CCTCGACGGC GCAGCAGCAT ATCGATTTCT ACGGCACGCT GCGGGCCAGG
CTCGGCGTCG CGGCGGGGCG ATGGCTCGGC TACGTCACCG GCGGCCTCGC CTATGAGCAC
GAGCGCTATC TGACCGAACC CGGCGCCGGC AAGGTGCTGA ACGGCCGGAT CGGCTGGGCC
GCGGGCGCGG GCCTGGAATA CGGCTTCACG CCGAACTGGA GCGCGCGGAT CGAATATCTC
TACAGCGACT TCGGCAACGC TTCGGTGGGG TTGCCGACCG GCGCCCGCTA CGACACCGCG
ATGAATCTGC AGACGGTCCG GATCGGCGTC AATCGCCGGA TCGACTGGCT GGGCTCGGGC
GAGACGGCTC CGTTCGCGAC CGTCGCCGAT CCGGACTCCG ACCGCTGGGA AATCCACGGC
CAGACCACCG TGGTCGGCCA GGGCTATCCC TCGTTCCGCG CGCCCTATAG CGGCGCCAAC
AGTCTGACGC CGAACGCGCA GTTCAAATCG ACCTGGAGCT CCGGCCTGTT CGCCAATGTC
CGGCTGTGGG ACGGCGGCGA ATTGTATCTC GGCCCGGAAT TCCTGCAGGG CTTCGGGCTG
AGCGACACCG TCGGCGTCGC CGGCTTTCCC AATGGCGAGG GGCAGAAATC CGGCTTCGCT
TTTCCGCATA TCAGCCCGTC GCGATTCTAT CTGCGCCAGA CTTTCGGCCT CGGCGGCGAG
CAGGAACAGC TCGCCTCCAG CGCATCGCAG CTCTCGGGCA AGGCCGACAT CTCGCGGCTG
ACGCTGCAGG TCGGGCGCTT CAGCGTGCTC GACGCGTTCG ACGGCAACGC CTATGCGCAC
GACCCGCGCC GCGACTTCAT GAACTGGTCG ATCTGGGCGT CCGGCGCGTT CGACTACGCC
GCCGACAAGC TCGGCCTCAC CTACGGCGCC ACCGCCGAAC TGAACCAGAA GCAATGGGCG
CTGCGCGCCG GCTACTTCCT GATGGACGCG GAATCCAACT CCAACAATTT CGACATGCGG
CTGGGCCAGC GCGGCCAATA TGTCGCCGAA CTGGAGACTC GCTATGCGCT GTTCGGCCAG
CCCGGCAAGC TGCGCACGCT GGCGTTCCTC AACAGCGTCT ATGCCGGCAG CTATCGCGAG
ACGCTCGACA ACCCGCTGCT GAACCTCGAC ATCAGCCAGA CGAGGCGCGG CCGGATCAAA
TACGGCTACG CGCTCAATCT CGAACAGGCG GTGAGCGACG ACATCGGCGT GTTCGGACGC
TGGAGCTGGA ACGACGGCAA GAACGAGATC ATGGCGTTCA CCGACATCGA CGACAGCCTG
TCCGGCGGCG TCTCGATCCG CGGCCTGCGC TGGGGCCGGC CGGACGACGT CATCGGCATC
GCCGGCGCGA CCAACGGGCT GTCGCGCGAC CACCGCGATT TCCTCGCCGC CGGCGGGCTC
GGCCCGCTGA TCGGCGACGG CGCGCTCAAT TATCGCCGCG AGAATTTGCT CGAGACCTAC
TACGCCTACG CGATCAACCG CGCCTGGACC GCGACCGCCG ACTATCAGTT CATCGTCAAC
CCGGCCTACA ACGCCGACCG CGGCCCGGTC TCGGTGTTCA GCGCCCGGCT GCACGGCGAG
TTCTGA
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| Protein sequence | MIHPRRCATM RPIVTTALML GGLVLPQAAS AADALKALPS PAMDWSGFYV GAHAGYVRGH
ADARLQDPTF AASQSSGSGG VTAGAQAGYN ILTRAGVLFG VEADISFPSY LPANAVLSEF
DNATSTAQQH IDFYGTLRAR LGVAAGRWLG YVTGGLAYEH ERYLTEPGAG KVLNGRIGWA
AGAGLEYGFT PNWSARIEYL YSDFGNASVG LPTGARYDTA MNLQTVRIGV NRRIDWLGSG
ETAPFATVAD PDSDRWEIHG QTTVVGQGYP SFRAPYSGAN SLTPNAQFKS TWSSGLFANV
RLWDGGELYL GPEFLQGFGL SDTVGVAGFP NGEGQKSGFA FPHISPSRFY LRQTFGLGGE
QEQLASSASQ LSGKADISRL TLQVGRFSVL DAFDGNAYAH DPRRDFMNWS IWASGAFDYA
ADKLGLTYGA TAELNQKQWA LRAGYFLMDA ESNSNNFDMR LGQRGQYVAE LETRYALFGQ
PGKLRTLAFL NSVYAGSYRE TLDNPLLNLD ISQTRRGRIK YGYALNLEQA VSDDIGVFGR
WSWNDGKNEI MAFTDIDDSL SGGVSIRGLR WGRPDDVIGI AGATNGLSRD HRDFLAAGGL
GPLIGDGALN YRRENLLETY YAYAINRAWT ATADYQFIVN PAYNADRGPV SVFSARLHGE
F
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