| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0545 |
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| Symbol | |
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| ID | 3909584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 610543 |
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| End bp | 613704 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882433 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_484167 |
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| Protein GI | 86747671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0920041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT CGACCCGCCT GACGCTGGCG ATGGTGGCGC TGGTCCTGGT GACCACGGCG
GTCCTCGGCT TTTTGAACTA CCGCAGCATC GTCGAATTGG TGATGCCCCG CGCCTTGCTG
CAATTGCAGA CGCGCTCGCA GCTTCATGCG CTGCTGATGG ATGCGTATCT GCGCGGCACG
CGCGCGGACG CGGTCAGTGC GCAGGCCTCC ACGACCCTCC GCGATCTGCT CGCCAACCGC
GACCGCGCCG GCGAGGCGAC CCCCGACTGG CGTCGGCGAA TCGAGGATCG GTTCGCCGCG
GAAATGGCCG GGAAGCCGAA CTCCGCCATC CTGCGCATCC TCGGGCCCGA TGACGGCGGC
CGCGAACTGG TGCGGGTCGA CCGACTGGGC CCGAACGGCA CGATCCGCGC GACACCGGCG
GCGCAGCTGA CGCGACGCGG CGACCGCGGC TATTTCAAGC AAGGCATGGC GCTGCCACCC
GGCGAGGTGG CGATCTCCCG GATCGAACTG AACAAGACGG CGACCGGACT GGAAATTCCC
CACGTCCCCA CCGTGCGCAT CATGGCGCCG ATCGATGCCG GCGACGGCAC GCGGCTCGGC
GTGCTGGTGA TCAACACCAA TCTCGGCGCG CTGTTCGAGC GGGTCCGAAA CAGCGTCGTC
GTCGGCAACC TGACCTACAT CGTCAACGAC GCCGGCGACT ATCTGCTGCA TCCCGACCGC
TCGCGCGAAT TCGGCTTCGA TTTCGGCAGG CCCAGCCGCG TCCAGGATGA TTTCCCGGCA
TTCGCGGCAC TGCTCGACGG CAAGGACACC ACCCCGCGCG TGATCGAGGA TCGCACCGGG
CAACGCTTCG GCGCCGGCTG GGGCTGGGTG CGTCTCGCCG ACGGTCCGAC GATCGGCGTG
ATCGAGATGC GGCCGTATCA ATCCCTGACC TCGGTGCAGA CGGCGGTCCG CAATTCGACG
CTGACGGGCG GTGCGGTCGC GGTGCTGGTG GCGATGCTGA TGGCGTTTCC GCTGGCGAAG
TCGCTGACCC GGCCGCTGGT CCGCATCACC CGCTCGGTTC AGGCGTTCGC GCGCGGCGAA
AAATTGGAGC TCGCTCCCGG CGGCGGCCAG GAGATCAAGC TGCTGGCCGA AGCCTTTTCA
CAGATGACCC GCGAAGCCGA GCGCAAAGCG ATCGCCCTCG CCGAGGAGGC GGAAGAGCGC
AGCCGCATCG CCGGGGTGCT GCAGAACACC ATCGACAACA TGGTCGATCC GGTGCTGGTC
GCGGATGCGC GCGGCATGGT GATGCTCACC AATCCGGCGG CGCGCGACCT GTTCGGGACG
CTGTCCGGCG TCGGCCTGCT CAACACCACC CGCTCGTTCG ACCGCTACTA TCCGGACGGA
ACCCCGCTGC CGCCCGACCA ATCGCCGCTG CTGCGCGCCT ATCGCGGCGA AACCATCGTC
AATTTCGAAT TCATGGTGCA GCCGATCGGA TCGGACCGCA GATCCTATCT GATCGCGAAC
GGCCGGCCGC TGCGCAGCGA GACCGGCGAG AACCAGGGCG CGGTGATGGT GTATCACGAC
ATCACCCAGA CCAAGACGGC CGAGAAGGCG TTGCGCCGCA GCGAGCAGAT GGCGCGGGCG
ATCATCGACA CCGCGCTCGA CGCCTTCGTG CAGATCGACG CGCTCGCCAC GATCACCGAA
TGGAGCCCGC ACGCCGAGGA AATGTTCGGC TGGCGTCGCG CCGAAGCGAT CGGCCGCAAC
GTGTTCAAGT TGATCATCCC GCCCGACCAG TTCGAGCAGC GCACCGAGGA GTTCAAGCAG
TTCGCATCGA CGCTCGGGCG CGACAGCTCG GGCTTCCGCG TCGAGATCGA ATCGATCCGC
AACAACGGCA CGCCGATCCC GCTCGAAGTC GCGATGACCG CGCTGTATCG CGACGGCAGC
TTCGTCATCA ACGCGTTCCT GCGCGACCTG ACCGAGAAGA TCGCGTTCGA GGAGCAACTC
CGGCAATCGC AGAAGATGGA GTCGATCGGC CAGCTCACCG GCGGCATCGC GCACGACTTC
AACAACATGC TGACGGTGAT CACCGGCACC ATCGACATCA TCAGCGACGG CGTCGCCGAG
CAGCCGCATC TGGCGAACAT CGCCAAGCTG ATCAGCGAGG CGGCCGATCG CGGCGCCGAG
TTGACCCGGC TGCTGCTCGC CTTCGCCCGC AAGCAGCCGC TGCGGCCGGA CGACACCGAC
GTCAACGCCC TGGTGGCCGG GCTGCAGAGC CTGCTGCGGC CGACACTGGG CGAACAGATC
GAAGTCGAGA CCTCGCTCGC GGACAACGTC TGGCCGATTT ACGTCGATCG CGGCCAGCTC
GAATCCGCGC TGGTCAATCT CGCGGTCAAC GCCCGCGACG CGATGCCGAA CGGCGGCAAG
CTGACGCTGG AGACCTGCAA CATCGTGGTC GACCAGGAAT TCGCCAGGCG GCTCGGCAAT
GTCGAGGTCG GCTCCTATGT GATGATCGCG ATCACCGATT CGGGCTGCGG CATTCCCGAG
GCGATCCGCG GCAAGGTGTT CGATCCGTTC TTCACCACCA AGGACATCGG AAAAGGCACC
GGGCTCGGGC TGAGCATGGT GTACGGCTTC ATCAAGCAGT CCGGCGGACA CATCACGCTG
TACAGCGAGG AAGGCCTCGG CACCACGTTC CGGCTGTATC TGCCGCGCGC CACCGCCGAG
ATCGAACGCC AGGCGCCGGC GACGTCGGAG CAGGGCGCGA TCGGCGGCAC CGAGACCATC
CTGGTCGTCG AGGACGACGC CATGGTGCGC AGCTACGTCA ACGCTCAGCT CAAGAGCCTC
GGCTACACCA CCCTGTCGGT CGGCAACGCC ACGGCCGCGC TGTCGATCGG AGACAGCGAC
ACGCAATTCG ACCTGCTGTT CACCGACGTG GTGATGCCGG GCCCCTACAA CGGCGTGCAG
CTGGCCGCCG AAATGAGCCT GCGCCGGCCC GGGCTGAAGG TGCTGTTCAC CTCCGGCTAT
TCCGAGAACG CCCTGATCCA CAACGACCGG ATCGATTCCG ATATCCTGCT GTTGTCGAAG
CCGTATCGGC GCAGCGATCT CGCCCGCATG ATCCGCCTCG CGCTGAGTCC CGCCGCCGAC
ACCGTGACGG CAGCCGGCGA AGTGGACAAT GCGACGGTCT GA
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| Protein sequence | MKLSTRLTLA MVALVLVTTA VLGFLNYRSI VELVMPRALL QLQTRSQLHA LLMDAYLRGT
RADAVSAQAS TTLRDLLANR DRAGEATPDW RRRIEDRFAA EMAGKPNSAI LRILGPDDGG
RELVRVDRLG PNGTIRATPA AQLTRRGDRG YFKQGMALPP GEVAISRIEL NKTATGLEIP
HVPTVRIMAP IDAGDGTRLG VLVINTNLGA LFERVRNSVV VGNLTYIVND AGDYLLHPDR
SREFGFDFGR PSRVQDDFPA FAALLDGKDT TPRVIEDRTG QRFGAGWGWV RLADGPTIGV
IEMRPYQSLT SVQTAVRNST LTGGAVAVLV AMLMAFPLAK SLTRPLVRIT RSVQAFARGE
KLELAPGGGQ EIKLLAEAFS QMTREAERKA IALAEEAEER SRIAGVLQNT IDNMVDPVLV
ADARGMVMLT NPAARDLFGT LSGVGLLNTT RSFDRYYPDG TPLPPDQSPL LRAYRGETIV
NFEFMVQPIG SDRRSYLIAN GRPLRSETGE NQGAVMVYHD ITQTKTAEKA LRRSEQMARA
IIDTALDAFV QIDALATITE WSPHAEEMFG WRRAEAIGRN VFKLIIPPDQ FEQRTEEFKQ
FASTLGRDSS GFRVEIESIR NNGTPIPLEV AMTALYRDGS FVINAFLRDL TEKIAFEEQL
RQSQKMESIG QLTGGIAHDF NNMLTVITGT IDIISDGVAE QPHLANIAKL ISEAADRGAE
LTRLLLAFAR KQPLRPDDTD VNALVAGLQS LLRPTLGEQI EVETSLADNV WPIYVDRGQL
ESALVNLAVN ARDAMPNGGK LTLETCNIVV DQEFARRLGN VEVGSYVMIA ITDSGCGIPE
AIRGKVFDPF FTTKDIGKGT GLGLSMVYGF IKQSGGHITL YSEEGLGTTF RLYLPRATAE
IERQAPATSE QGAIGGTETI LVVEDDAMVR SYVNAQLKSL GYTTLSVGNA TAALSIGDSD
TQFDLLFTDV VMPGPYNGVQ LAAEMSLRRP GLKVLFTSGY SENALIHNDR IDSDILLLSK
PYRRSDLARM IRLALSPAAD TVTAAGEVDN ATV
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