Gene RPB_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0542 
Symbol 
ID3909581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp606952 
End bp607452 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID637882430 
Producthypothetical protein 
Protein accessionYP_484164 
Protein GI86747668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.29141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA GTTCGAAACT ACGTCCGCAG CCGGAACCAT CGGCGACCTC GTCCCCGTGC 
TACGAGGGGG ATCTTTACGG TTGGGTTCAG CATCAAGTCG CGCTGCTGAA GGCCGGCAAG
CTGTCGGAGA TCGATGCCGG GAATGTCGCC GAGGAGTTGT CGGACGTGGG CAGCGAGCAG
TACGACAAAC TCGAAAGCGC GATTCGCGTT GTGCTGTTGC ATCTCATGAA GTGGGATCAC
CAGCCGACGC ATCGTTCCAA GAGCTGGGTT TTTTCGATCC GAACTCAGCG CCGACATATC
GTCAAGGTTC TCAAGAAGAA CCCCAGCCTA AGGCCGCATA TTCCTGAAGC GATCGGTGAT
GCCTACCACG ATGCTCGCGA CGAAGCCCAA CAGGAAACCG GCCTCCCGGC AAGCGTCTTC
GAGTTGACCT GTCCGTATGA TTGGGATGCG ATCCAATCTC GTGCCGTTGA GTTTGAAGAC
ATCCGCTCAC CGGAAGAGTA A
 
Protein sequence
MTTSSKLRPQ PEPSATSSPC YEGDLYGWVQ HQVALLKAGK LSEIDAGNVA EELSDVGSEQ 
YDKLESAIRV VLLHLMKWDH QPTHRSKSWV FSIRTQRRHI VKVLKKNPSL RPHIPEAIGD
AYHDARDEAQ QETGLPASVF ELTCPYDWDA IQSRAVEFED IRSPEE