Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0537 |
Symbol | |
ID | 3909576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 602558 |
End bp | 603901 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882425 |
Product | hypothetical protein |
Protein accession | YP_484159 |
Protein GI | 86747663 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.947499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.569692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC GCGAGATCAT GGACTGGGTG ACGTCCGGTA TCGTCATCGC CTGTCTGTTC GGCTCGGCGT TCTTCTCCGC CAGCGAGACC GCACTGACCG CGGCCTCGCG CGCCAACATG ATGCGGCTGG CGAAGCAGGG CAGCCGCAAC GCCGGCATCG TCGGCCGGCT GCTGGCGACG CGCGAGCGGA TGATCGGCGC GCTGCTGCTC GGCAACAACA TCTTCAACAT CGGCGCCTCG GCGCTGGCGA CCGGCCTGTT CACGGCCTGG TTCGGCGAGT TCGGCGTGCT CTACGCCACC GCGGTGATGA CCGCGCTGGT GGTGATCTTT GCCGAGGTGC TGCCCAAGAC CGTCGCCATC AACGCGCCGG ATCGTTTCGC GCTGCTGGTC GCCAAGCCGA TGCGGCTGAT GGTGCTGGTG CTCGGCCCGC TGCTCACGGT GATCGAGGCG CTGGTCCGCG TGCTGATGCG GCTGCTCGGC ATCAAGGTCG GCGCGCATCA GTCGCTGCTG TCGGCGACCG AGCGGCTGCG CGGCGCGGTC GAACTGATCC ATCACGAAGG CGGCGTCGCC AAGCACGACC GCGACATGTT CGGCGGCCTG CTCGATCTCA GCGAATTGCA GGTCTCCGAC GTGATGGTCC ACCGCACCGA GATGGTGATG GTCAACGCCG ACCTGCCGCC GGAGGAACTG GTTCGCGAGG TGCTGGCCAC CGAGTACACC CGGATTCCGC TGTGGCGCGA GAAGCCGGAG AACATCATCG GCGTGCTGCA CGCCAAGGAT CTGCTGCGGG CGATGCGCGC CGCCGACGGT GACGCCGGCA AGATCGACGT CAACAAGATC GCGCTGCCGC CGTGGTTCGT GCCGGAGATG CGGCTGGTGT CGGAGCAGCT CAAGGCGTTC CGCTCGCGCA AGACCCACTT CGCGCTGGTG GTCGACGAAT ACGGCGAAGT CGAAGGCATG GTGACGCTCG AGGACATCCT CGAGGAAATC GTCGGCGACA TCTCCGACGA GCACGACGTC GTGGTCGCCG GCGTTCGCAC CCAGCCGGAC GGCTCGGTCG TGGTGGATGG TTCGGTGCCG ATCCGCGATC TCAATCGCGC GATGGACTGG AATCTGCCGG ACGAGGAAGC CACCACGATC GCCGGCCTGG TGATCCACGA GGCGCGCTCG ATCCCGGTGC GGGGCCAGAG CTTCACCTTC CACGGCTTCC GCTTCCGGGT GCTGCGCCGC GAGCGCAATC GCATCACCGC GCTGCGCATC GTCCCCGTGC TGCGCGAGAC AGAAGCCGAG CTCGCCGACA AGAAGTCCGG GAAGATCGCG CGCATCGGCG GCCCCGCGGC GTGA
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Protein sequence | MSEREIMDWV TSGIVIACLF GSAFFSASET ALTAASRANM MRLAKQGSRN AGIVGRLLAT RERMIGALLL GNNIFNIGAS ALATGLFTAW FGEFGVLYAT AVMTALVVIF AEVLPKTVAI NAPDRFALLV AKPMRLMVLV LGPLLTVIEA LVRVLMRLLG IKVGAHQSLL SATERLRGAV ELIHHEGGVA KHDRDMFGGL LDLSELQVSD VMVHRTEMVM VNADLPPEEL VREVLATEYT RIPLWREKPE NIIGVLHAKD LLRAMRAADG DAGKIDVNKI ALPPWFVPEM RLVSEQLKAF RSRKTHFALV VDEYGEVEGM VTLEDILEEI VGDISDEHDV VVAGVRTQPD GSVVVDGSVP IRDLNRAMDW NLPDEEATTI AGLVIHEARS IPVRGQSFTF HGFRFRVLRR ERNRITALRI VPVLRETEAE LADKKSGKIA RIGGPAA
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