| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0526 |
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| Symbol | |
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| ID | 3909430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 587348 |
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| End bp | 588187 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882414 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_484148 |
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| Protein GI | 86747652 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.928222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTA CGCCCCGCAC CTGGTTCATC ACCGGCACCT CGTCCGGCTT CGGTCGGGCG
ATGACCGAGC AACTGCTGGC GCGCGGCGAC CGTGTCGCCG CCACGCTGCG CAGGCCGGAC
GCGCTCGACG ATCTCGATCA GCACTATGGC GACCGGCTCT GGATCGCGCA GCTCGACGTC
ACCGACAGCG CGGCGGTCAG CACTGTGGTC GAGCGCGCGT TTGCCGAGCT CGGCCGCATC
GACGTCGTGG TCAACAACGC CGGCTACGGT CTGCAGGGGG CGGCGGAGGA ACTGAGCGAC
GCGCAGATCC GGCATCAGAT CGACACCAAT GTGATCGGCT CGATCCAGAT TGTGCGCGCG
ACCTTGCCGC ATCTGCGAGC CCAGGGCGGC GGCCGAATCC TGCAGCTGTC GTCGATGGGC
GGCCAAGTGA CGTTCCCCGG CCTCAGCCTG TATCACGCCT CGAAATGGGC GATCGAAGGC
TTCATCGAAG CGGTCGCCCA GGAGGTGTCA CCGTTCAAGA TCGGCTTCAC GATTGTCGAG
CCGGGCGCTG CACGCACTGG CTTTGGCAGT GGCCTGGTCA ATGCCGAACC GCTCGCGAGT
TACGACGACA CCCCGGTCGG CGAGATCCGG CGGGCGTTCG CGGCTGGTTT ATTCCCTGTG
CCAGGCGACG CGCAGAAGAT GGCACAGGCG ATGATCGACT CGGTCGATTG CACGCCGGCG
CCGCTGCGCC TCACCCTCGG CAGCGATGCC TACGCCATGG TGCGTGCCAA CCTGGTCGAG
CGGCTCGCTG CGCTCGATGC ACAGAAGGCC GTTGCGCTCT CCACGGATCG CGACGGCTGA
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| Protein sequence | MTSTPRTWFI TGTSSGFGRA MTEQLLARGD RVAATLRRPD ALDDLDQHYG DRLWIAQLDV
TDSAAVSTVV ERAFAELGRI DVVVNNAGYG LQGAAEELSD AQIRHQIDTN VIGSIQIVRA
TLPHLRAQGG GRILQLSSMG GQVTFPGLSL YHASKWAIEG FIEAVAQEVS PFKIGFTIVE
PGAARTGFGS GLVNAEPLAS YDDTPVGEIR RAFAAGLFPV PGDAQKMAQA MIDSVDCTPA
PLRLTLGSDA YAMVRANLVE RLAALDAQKA VALSTDRDG
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