Gene RPB_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0462 
Symbol 
ID3909807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp509825 
End bp510559 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID637882349 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_484084 
Protein GI86747588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.45404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA CGGCCGAATT CGATCCCGCG AAGGTCGCCA AATCGCTGTT GCGCCGCCGG 
CGGGAGGGGG CGCTGGCCAC CCTGCTGCGC GACGGCGGCG CGCCGTATTG CTCGCTGGTC
AACCTCGCCA GCGCGCCCGA CGGCTCCCCG GTGCTGCTGA TTTCCCGCCT GGCGGTGCAC
ACCCGGAACC TGCTCGCGGA CCCGCGGGTG TCGCTGATGC TCGACGAGCG CGCCGCGGGC
GACCCGCTGG AGGGCGCCCG GATCATGCTG CAGGGCGTCG CATCCGCGGC CGCTCCGGCC
GATCTTCCGC AGCTCCGCCG GCGCTATCTC GCCGCCCACC CGGGCGCGGC CGACTACATC
GATTTTACCG ATTTCGCGCT GTACCGCATC GAGACCAGCA GCGCGCATCT GGTGGCAGGC
TTCGGCCGGA TCGTCGATCT GGAGCCGTCG GCCTATCTGA CCGATCTCGA CGGCGCCGCC
AGCCTGCTCG ACGCCGAGGA GTCCGCGGTC GAACACATGA ATGCGGATCA TTTGGGCACG
ATGAATCTTT ATGCGACCAG GCTGCTCGGC GCCGCATCGG ATGACTGGCG CTGTAACGGC
CTCGACCCCG AGGGGGTCGA TCTCGCGGCC GGCCGGACCA CCCTGCGGCT GTCGTTTCCG
GAGCGGGTGA CCACCCCCGC GGCGCTGCGG CACATGCTCA AGCGCATGGC AGACATCGCC
CGCGAGACGG AATGA
 
Protein sequence
MQPTAEFDPA KVAKSLLRRR REGALATLLR DGGAPYCSLV NLASAPDGSP VLLISRLAVH 
TRNLLADPRV SLMLDERAAG DPLEGARIML QGVASAAAPA DLPQLRRRYL AAHPGAADYI
DFTDFALYRI ETSSAHLVAG FGRIVDLEPS AYLTDLDGAA SLLDAEESAV EHMNADHLGT
MNLYATRLLG AASDDWRCNG LDPEGVDLAA GRTTLRLSFP ERVTTPAALR HMLKRMADIA
RETE