Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0462 |
Symbol | |
ID | 3909807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 509825 |
End bp | 510559 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882349 |
Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Protein accession | YP_484084 |
Protein GI | 86747588 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0748] Putative heme iron utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.45404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA CGGCCGAATT CGATCCCGCG AAGGTCGCCA AATCGCTGTT GCGCCGCCGG CGGGAGGGGG CGCTGGCCAC CCTGCTGCGC GACGGCGGCG CGCCGTATTG CTCGCTGGTC AACCTCGCCA GCGCGCCCGA CGGCTCCCCG GTGCTGCTGA TTTCCCGCCT GGCGGTGCAC ACCCGGAACC TGCTCGCGGA CCCGCGGGTG TCGCTGATGC TCGACGAGCG CGCCGCGGGC GACCCGCTGG AGGGCGCCCG GATCATGCTG CAGGGCGTCG CATCCGCGGC CGCTCCGGCC GATCTTCCGC AGCTCCGCCG GCGCTATCTC GCCGCCCACC CGGGCGCGGC CGACTACATC GATTTTACCG ATTTCGCGCT GTACCGCATC GAGACCAGCA GCGCGCATCT GGTGGCAGGC TTCGGCCGGA TCGTCGATCT GGAGCCGTCG GCCTATCTGA CCGATCTCGA CGGCGCCGCC AGCCTGCTCG ACGCCGAGGA GTCCGCGGTC GAACACATGA ATGCGGATCA TTTGGGCACG ATGAATCTTT ATGCGACCAG GCTGCTCGGC GCCGCATCGG ATGACTGGCG CTGTAACGGC CTCGACCCCG AGGGGGTCGA TCTCGCGGCC GGCCGGACCA CCCTGCGGCT GTCGTTTCCG GAGCGGGTGA CCACCCCCGC GGCGCTGCGG CACATGCTCA AGCGCATGGC AGACATCGCC CGCGAGACGG AATGA
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Protein sequence | MQPTAEFDPA KVAKSLLRRR REGALATLLR DGGAPYCSLV NLASAPDGSP VLLISRLAVH TRNLLADPRV SLMLDERAAG DPLEGARIML QGVASAAAPA DLPQLRRRYL AAHPGAADYI DFTDFALYRI ETSSAHLVAG FGRIVDLEPS AYLTDLDGAA SLLDAEESAV EHMNADHLGT MNLYATRLLG AASDDWRCNG LDPEGVDLAA GRTTLRLSFP ERVTTPAALR HMLKRMADIA RETE
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