| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0461 |
|---|
| Symbol | |
|---|
| ID | 3909806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 508024 |
|---|
| End bp | 509637 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637882348 |
|---|
| Product | phosphoenolpyruvate carboxykinase |
|---|
| Protein accession | YP_484083 |
|---|
| Protein GI | 86747587 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
|---|
| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.497103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGAGA CGGGCGTGCA TAACGGTGCT CATGGCGCCG ACAAATTCGG ACTCAAAAAT
CTCAAGGGCG TCTACTGGAA TTTCGCCGCG CCGCAGCTCT ACGAGCATGC GCTGAAGAAC
GGCGAAGCGG TGCTGTCGGC CGACGGCGCG CTGTGCGCCG ACACCGGCGA ATTCACCGGC
CGCAGCCCGA AGGACAAGTT CACGGTCCGC GACGCCACCA CCGAGACCAC GATGTGGTGG
GGTGGCAATC AGTCGATCAC CGCCGAGCAG TTCGAGACGC TGTATCAGGA CTTCCTCAAG
CACGCCGAAG GCATGACGCT GTTCGCGCAG GATCTGTACG GCGGCGCCGA TCCGTCGTTC
CAGATCAAGA CCCGCGTGTT CACCGAACTC GCCTGGCACT CGCTGTTCAT CCGCACCCTG
CTGCGCCGTC CCGACCGCGC CGCGCTGGAG AGCTTCGTTC CCGAGCTGAC GCTGATCGAT
CTGCCGAGCT TCCGCGCCGA TCCGAAGCGC CACGGCTGCC GCTCCGAGAA CGTCGTGGCG
ATCGATTTCG CCCGCAAGAT CGTGCTGATC GGTGGCACCC AATACGCCGG CGAAATGAAG
AAGAGCGTGT TCACCACGCT GAACTACTAT CTGCCCGAGA AGGGCGTGAT GCCGATGCAC
TGCTCGGCCA ATGTCGGCCC GCAGGGCGAC ACCGCGATCT TCTTCGGCCT GTCCGGCACC
GGCAAGACCA CGCTGTCGGC CGACCCGAAC CGCACGCTGA TCGGCGACGA CGAGCACGGC
TGGGGCAAGG ACGGCGTCTT CAACTTCGAA GGCGGCTGCT ACGCCAAATG CATCAAGCTG
TCGCCGGAAG CCGAGCCCGA GATCTTCGCG GCGTCGTCGC GGTTCGGCGC GGTACTGGAA
AACGTCGTGC TCGACGAGAT CACCCGCAAG CCGGATTTCG ACGACGGCTC CAAGACCGAG
AACACCCGGT CCGCCTATCC GCTGGAATCG ATCCCGAACG CGTCGCTGAC CGGCCGCGCC
GGCCAGCCGA AGAACGTGGT GATGCTCGCC GCCGACGCCT TCGGCGTGAT GCCGCCGATC
GCCAAGCTGA CCCCGGCGCA GGCGATGTAT CACTTCCTGT CCGGCTACAC CGCCAAGGTC
GCCGGCACCG AGCGCGGCGT CACCGAGCCC GAGCCGGAAT TCTCGACCTG CTTCGGCTCG
CCGTTCCTGC CGCGCGATCC GTCGGTCTAC GGCAACATGC TGCGCGAACT GATCGCCAAG
CACGATGTCG ATTGCTGGCT GGTCAACACC GGCTGGACCG GCGGCATCTA CGGCACCGGC
CACCGCATGC CGATCAAGGT CACCCGCGCG CTGCTGACCG CGGCGCTCGA CGGTAGCTTG
CGCAACGTCG AATTCCGCAC CGATCCGTAT TTCGGCTTCG CGGTGCCGAC GTCGCTGCAT
GGCGTGCCGA GCGACATCCT CGACCCGGTC AAGACCTGGG CCGACAAGGC CGCGTTCGAT
GCGACGGCGC GAAAACTGGT CGGCATGTTC CAGAAGAACT TCGCCAAGTT TGAAGCCCAG
GTCGACGCCG ACGTCCGCGC CGCCGCGCCG GACGTCAAGA TGGCGGCCGA GTAA
|
|---|
| Protein sequence | MQETGVHNGA HGADKFGLKN LKGVYWNFAA PQLYEHALKN GEAVLSADGA LCADTGEFTG
RSPKDKFTVR DATTETTMWW GGNQSITAEQ FETLYQDFLK HAEGMTLFAQ DLYGGADPSF
QIKTRVFTEL AWHSLFIRTL LRRPDRAALE SFVPELTLID LPSFRADPKR HGCRSENVVA
IDFARKIVLI GGTQYAGEMK KSVFTTLNYY LPEKGVMPMH CSANVGPQGD TAIFFGLSGT
GKTTLSADPN RTLIGDDEHG WGKDGVFNFE GGCYAKCIKL SPEAEPEIFA ASSRFGAVLE
NVVLDEITRK PDFDDGSKTE NTRSAYPLES IPNASLTGRA GQPKNVVMLA ADAFGVMPPI
AKLTPAQAMY HFLSGYTAKV AGTERGVTEP EPEFSTCFGS PFLPRDPSVY GNMLRELIAK
HDVDCWLVNT GWTGGIYGTG HRMPIKVTRA LLTAALDGSL RNVEFRTDPY FGFAVPTSLH
GVPSDILDPV KTWADKAAFD ATARKLVGMF QKNFAKFEAQ VDADVRAAAP DVKMAAE
|
|---|
| |