Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0417 |
Symbol | |
ID | 3909973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 460756 |
End bp | 461412 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882303 |
Product | autoinducer synthesis protein |
Protein accession | YP_484039 |
Protein GI | 86747543 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTC ACGTCGTGCG CCGCGAGAAC CGCGAGTTCT ACGCGGATCT GATCGAGCAG CAGTTTCGTA TTCGCCACCA GATCTATGTC GTTGAACGGA AGTGGACCGA ACTGGCTCGG CCCGATGGCA GCGAGATCGA TCAGTTCGAC ACCGATGACA CGGTGTACCT GCTCGGCCTA CAGAACGGCG AAATCGTCGC CGGCATGCGG ATGGTACCGA CGACGTCGCC GACGTTGCTG AGCGACGTCT TCCCGCAGCT CGCACTGGAA ACTCCGGTGC GGCGCCCCGA CGTCTACGAA TTGTCGCGGA TCTTCGTCGT CCCGAACAGG CGGGGCGAGC ACGCCGGGCC CCGCGCCGAG GCGGTGATCC AGGCTGCAGC GATGGAATAC GGCCTCGCCA TCGGCCTGTC GGCTTTTACC ATCGTGCTGG AAACCTGGTG GCTGCCGCGG CTGCTGGATC AGGGCTGGCG CGCGCGTCCG CTCGGACTGC CACAGGACAT CGCCGGCATG TCGACCACCG CGGTGTTGGT CGATGTCGAC GATCAGGCCT GGCTGGAGAT CTGCGCGCGC CGGTCGGTCC CCGGCCCGGC GCTGCAGTGG CGGGGCCTCG ACAATGTCGA CCGCAATCCC CTTCCCAACA TCATGGAGCT GTCATGA
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Protein sequence | MDVHVVRREN REFYADLIEQ QFRIRHQIYV VERKWTELAR PDGSEIDQFD TDDTVYLLGL QNGEIVAGMR MVPTTSPTLL SDVFPQLALE TPVRRPDVYE LSRIFVVPNR RGEHAGPRAE AVIQAAAMEY GLAIGLSAFT IVLETWWLPR LLDQGWRARP LGLPQDIAGM STTAVLVDVD DQAWLEICAR RSVPGPALQW RGLDNVDRNP LPNIMELS
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