Gene RPB_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0385 
SymbolleuS 
ID3908823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp426566 
End bp429190 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content66% 
IMG OID637882271 
Productleucyl-tRNA synthetase 
Protein accessionYP_484007 
Protein GI86747511 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.039423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AACGTTACAA CGCCCGCGAA TCCGAGCCGA AATGGCAGGC GAAATGGGAC 
GAGGCGAAAA TTTTCGCCAC CCGGAACGAC GACCCGCGCC CAAAGTATTA CGTGCTGGAG
ATGTTCCCGT ATCCGTCGGG CCGCATCCAT ATGGGGCACG TCCGCAACTA CACCATGGGC
GACGTGGTGG CGCGGACGAT GCGGGCGCGC GGCCACAACG TGCTGCACCC GATGGGCTGG
GACGCGTTCG GCCTGCCGGC CGAGAACGCC GCGATTGAGC GCAAGGTCGC GCCCAAGGCC
TGGACCTACG ACAACATCGC TTCAATGAAG AAGCAGCTCC AGACCATGGG GCTGTCGCTC
GACTGGGCGC GTGAATTCGC GACCTGCGAT CCGACCTACT ACAAGCATCA GCAGAAGATG
TTCCTGGATT TCCTGAAGGT CGGCCTGGCC GAACGGGAAA CCCGCAAGCT CAACTGGGAC
CCGGTCGACA TGACCGTGCT GGCCAACGAG CAGGTGATCG ACGGCCGCGG CTGGCGCTCC
GGCGCGGTGG TCGAGCAGCG CGAGATGAAC CAGTGGGTGT TCAAGATCAC CCGCTACGCG
CAGGACCTGC TCGACGCGCT GGAAACGCTC GACCGCTGGC CCGACAAGGT CCGGCTGATG
CAGCGCAACT GGATCGGCCG CAGCGAAGGC CTGTTGGTGC GGTTCGCGCT GGATGCGGCG
ACGACGCCGG CCGGCGAGAC CGAGCTGAAG ATTTTCACCA CGCGGCCCGA CACGCTGTTC
GGCGCCAAAT TCATGGCGAT CGCGCCGGAT CATCCGCTGG CGCAGGCGGC GGCCGCCAAG
AACGAGAAGA TCGCGGCCTT CGTCGAGGAG TGCAAGAAGC GCGGCACCGC GCAGGCCGAG
ATCGACACCG CCGAGAAGCA GGGCATCGAC ACCGGCATCC GCGCGCTGCA TCCGTTCGAC
CCGACCTGGC AGATCCCGGT CTATGTGGCG AATTTCGTGC TGATGGAATA CGGCACCGGC
GCCATCTTCG GCTGCCCGGC GCACGACCAG CGCGACCTCG ATTTCGTCAA CAAGTACCAG
CTTGGTAATA CGCCCGTTGT GTGCCCCGAG GGCCAGGACC CTTTGAGCTT CGTCATCACC
GACGAGGCCT ATGACGGCGA CGGCCGCCTG ATCAATTCGC GCTTCCTCGA CGGCATGAGC
ATCGCGGACG CGAAGGAAGA AGTGGCGAAG CGGCTGGAGA CAGCGACGCT CGGCAATGCG
CCGGTCGGCG AGCGCAAGGT CAATTTCCGC CTGCGCGACT GGGGGATTTC ACGCCAGCGC
TATTGGGGCT GCCCGATCCC GGTGATCCAT TGCGAGGTCT GCGGCGTCGT GCCGGTGCCG
GACAAGGACC TGCCCGTCGT GCTGCCGGAG GACGTGTCGT TCGACAAGCC CGGCAACGCG
CTCGACCATC ACCCGACCTG GAAGCACGTG CCCTGCCCGC AATGCGGCGG CAAAGCGCAG
CGCGAAACCG ACACCATGGA CACCTTCGTG GATTCGTCCT GGTACTTCGC GCGCTTCACC
GATCCGTGGA ACGAGACCGC GCCGACCACG CCCGACGTGG TCAACCGGAT GCTGCCGGTC
GATCAATATA TCGGCGGCGT CGAGCACGCG ATCCTGCATC TCTTGTACAG CCGGTTCTTC
ACCCGGGCGA TGAAGGCCAC CGGCCATCTC GGCCTGGACG AGCCGTTCCG CGGCATGTTC
ACCCAGGGCA TGGTGGTGCA CGAGACCTAC CGCACCGCCG ACGGCCATTT CGCCTCGCCG
GCCGAAGTCG CGATCGTGGC CGAGGGCGAC GGCCGCCGCG CCACGCTGCT CGACGGCGGC
ACGCCGGTCG AGATCGGCCC GATCGAAAAG ATGTCGAAGA GTAAGCGCAA CACCGTCGAT
CCCGACGACA TCATCGGCTC TTACGGCGCC GACACCGCGC GCTGGTTCAT GCTGTCGGAT
TCGCCGCCGG ACCGCGACGT GATCTGGAGC GAGGAAGGCG TCAAGGGCGC ATCGCGCTTC
GTGCAGCGGC TGTGGCGGAT GGTGAATGAC GCCGCCGCCA TCGCCCGTTC GGCCCCGGCC
GAGCGGCCGG CGACGTTCGG CCCCGAGGCG CTGGCGGTGC GCAAGGCCGC GCATGGCGCG
CTCGACAAGG TGTTGAGCGG CATCGAACGG CTCGCCTTCA ATGTCAGCCT CGCCCATATC
CGCGAATTCG CCAACAGCTT CGGCGAGGCG CTGGCGAAGC CGGGCCAGCC GTCGCCGGAT
CTGGCCTGGG CGATCCGCGA GGCCGCGGTC ATCCTTGTTC AACTGTTTCA CCCGATGATG
CCGCATCTGG CCGAGGAATG CTGGGCGGCG CTGGGCCGGC CGGGCCTGGT CTCCGAGGCG
CTGTGGCCGC AAATCGAACG CGATTTGCTG GTCGAAGACA GCATCACCCT GCCGGTACAG
GTCAACGGCA AGAAACGCGG GGACATCACG GTGGCCAGGG ACGCCAACAC CCAGGAAATT
GAGGCTGCCG TTTTGGCCCT CGATGCGGTA AGACAGGCGC TGGACGGCAA GCCCGTCCGC
AAGGTGATCG TGGTGCCGCA GAGGATCGTG AATGTCGTCG GTTAG
 
Protein sequence
MSNERYNARE SEPKWQAKWD EAKIFATRND DPRPKYYVLE MFPYPSGRIH MGHVRNYTMG 
DVVARTMRAR GHNVLHPMGW DAFGLPAENA AIERKVAPKA WTYDNIASMK KQLQTMGLSL
DWAREFATCD PTYYKHQQKM FLDFLKVGLA ERETRKLNWD PVDMTVLANE QVIDGRGWRS
GAVVEQREMN QWVFKITRYA QDLLDALETL DRWPDKVRLM QRNWIGRSEG LLVRFALDAA
TTPAGETELK IFTTRPDTLF GAKFMAIAPD HPLAQAAAAK NEKIAAFVEE CKKRGTAQAE
IDTAEKQGID TGIRALHPFD PTWQIPVYVA NFVLMEYGTG AIFGCPAHDQ RDLDFVNKYQ
LGNTPVVCPE GQDPLSFVIT DEAYDGDGRL INSRFLDGMS IADAKEEVAK RLETATLGNA
PVGERKVNFR LRDWGISRQR YWGCPIPVIH CEVCGVVPVP DKDLPVVLPE DVSFDKPGNA
LDHHPTWKHV PCPQCGGKAQ RETDTMDTFV DSSWYFARFT DPWNETAPTT PDVVNRMLPV
DQYIGGVEHA ILHLLYSRFF TRAMKATGHL GLDEPFRGMF TQGMVVHETY RTADGHFASP
AEVAIVAEGD GRRATLLDGG TPVEIGPIEK MSKSKRNTVD PDDIIGSYGA DTARWFMLSD
SPPDRDVIWS EEGVKGASRF VQRLWRMVND AAAIARSAPA ERPATFGPEA LAVRKAAHGA
LDKVLSGIER LAFNVSLAHI REFANSFGEA LAKPGQPSPD LAWAIREAAV ILVQLFHPMM
PHLAEECWAA LGRPGLVSEA LWPQIERDLL VEDSITLPVQ VNGKKRGDIT VARDANTQEI
EAAVLALDAV RQALDGKPVR KVIVVPQRIV NVVG