| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0360 |
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| Symbol | |
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| ID | 3908626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 402018 |
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| End bp | 403286 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882246 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_483982 |
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| Protein GI | 86747486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.106341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCG AGATCGTCAC CTTCGGCTGC CGCCTCAACG CCTTCGAATC CGAAGTGATC
CGCCGCGAGG CGGAGGGCGC CGGCCTTACC GAGACGATCG TCGTCAATAG CTGCGCCGTG
ACCAATGAGG CCGTGGCGCA GGCGCGGCAG TCGATCCGCA AGCTCAAGCG CGCGCGGCCG
GACGCGCGCA TCGTCGTCAC CGGCTGCGCG GCGCAGACCG AACCGGCGAC CTTCGCCGCG
ATGGACGAGG TCGATCGCGT CATCGGCAAT GACGACAAGA TCCGCACGGA GGCCTGGCGC
GAAGCGCGCG CGGCGTTCGA CGCCGATGCG TTCGGGCTCG GCAATGAAGA GAAAATCGCG
GTCGCCGACA TCATGGCGGT GCGCGAGATG GCGCCGCATC TCGTGGACGG TTACCAGAGC
GGCCTGCCGC GGGTGTTCGT GCAGGTGCAG AACGGCTGCG ACCATCGCTG CACCTTCTGC
ATCATCCCCT ATGGTCGTGG TAACTCCCGC TCGGTGCCGG TCGGCGCGGT GGTCGATCAG
GTCCGCGCGC TGGCCGAACG CGGCCATGCC GAGATCGTGC TGACCGGCGT CGATCTCACC
AGCTACGGCG CCGACCTGCC GGGCACACCG AAGCTCGGCA CGCTGGTGAA GAAGGTGCTG
CGCCACGTCC CCGAACTGCG GCGGCTGCGG ATCTCCTCGA TCGATTCCAT CGAGGCCGAT
CGCGACCTGC TCGATGCGCT CGCCAGCGAA GAGCGATTGA TGCCGCATCT GCATCTGTCG
CTACAGGCCG GCGACGATCT GATCCTGAAG CGGATGAAGC GGCGGCACGC GCGGCAGGAT
GCAATTGATT TCTGCGACGA GGTCCGCCGG CTGCGCCCCG ACATCGCGCT CGGCGCCGAT
CTGATCGCGG GCTTCCCGAC CGAGACCGAC GCGATGTTCC AACGCTCACT CGATCTCGTC
GCGGAGTGCG GCCTGACCTT CCTCCACGTA TTTCCCTATT CGAAACGCCC CGGCACCCCG
GCCGCCCGGA TGCCGCAGCT CGACGGCCGC GTCGTGCGCC AACGGGCCGC GCAACTCCGC
GCCGCCGGCG AGGCGGCGTT GCAGAAACGC CTTGCGGCGG AGATCGGCGC CACCCGCGCC
GTGCTGATCG AAAGTGCTGC GCAAGGCCGC ACCGAGCATT TCATCCCGGT GGCGATTGCG
GGCGTGGCGC CGGGCGACGT GCGGACGATG GCGATCCGCG GGCACGATGG AGTACGACTG
ATTGTTTAG
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| Protein sequence | MPVEIVTFGC RLNAFESEVI RREAEGAGLT ETIVVNSCAV TNEAVAQARQ SIRKLKRARP
DARIVVTGCA AQTEPATFAA MDEVDRVIGN DDKIRTEAWR EARAAFDADA FGLGNEEKIA
VADIMAVREM APHLVDGYQS GLPRVFVQVQ NGCDHRCTFC IIPYGRGNSR SVPVGAVVDQ
VRALAERGHA EIVLTGVDLT SYGADLPGTP KLGTLVKKVL RHVPELRRLR ISSIDSIEAD
RDLLDALASE ERLMPHLHLS LQAGDDLILK RMKRRHARQD AIDFCDEVRR LRPDIALGAD
LIAGFPTETD AMFQRSLDLV AECGLTFLHV FPYSKRPGTP AARMPQLDGR VVRQRAAQLR
AAGEAALQKR LAAEIGATRA VLIESAAQGR TEHFIPVAIA GVAPGDVRTM AIRGHDGVRL
IV
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