Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0296 |
Symbol | |
ID | 3907924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 334683 |
End bp | 335603 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882179 |
Product | thioredoxin |
Protein accession | YP_483918 |
Protein GI | 86747422 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0166723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAATCA TCGAGCAGGG CAGCGGTGCG GCCCCCCAGG CGGCGCCCGA TCTGATCAAG GACACCACGA CGCAGACCTT CGTCCGCGAC GTCATCGAAG AGTCCAAGCT CCAGCCGGTG CTGATCGACT TCTGGGCGCC CTGGTGCGGT CCCTGCCGCC AGCTCACCCC AATGCTGGAA AAGGCGGTCC GCGCTGCCGG CGGCAAGGTC AAGCTGGTCA AGATGAACAT CGACGAGCAT CCGTCGATCC CGGGCCAGAT GGGCATCCAG TCGATCCCCG CGGTGATCGC CTTCGTCGAC GGTCGCCCGG CCGACGGCTT CATGGGCGCG GTGCCGGAGA GCCAGGTCGC TGCCTTCATC GAGAAACTGA CCGCCGGCGT TCCCGGCGGC GCGCCGACGG CCGCGGAACT GCTGCAGGAA GCCGAGGCGG TGATGGCCGA GGGCGATCTG CAGACCGCCG GCGCGATCTA TGCCGAGGTG CTGCGCGCCG ACGCCGCCAA TGTCGAGGCG ATCGTCGGGC TGGCGCGCTG CTACATGGTG TCCGGCGCGG TCGACGAGGC CAAGGCGACG CTGGCCCAGG TGCCCGAAGC CAGACGCGAG GACGCCGCCG TCAAGGCGGT GCAGGCGATG ATCGATCTCG CCGCGCAGGC CGAGCAGGTC GGCCCGATCG CCGAGCTGGA GCAGAAGGTC GCCGCCGATC CGCTCGACCA TCAGGCGCGG TTCGATCTCG CCACCGCGCT CAATGCGGCC GGCCGGCGCG ACGAGGCCAC CACGCATCTG CTGGAGATCG TCCGGCGCGA CCGCAAGTGG AACGAGGACG GCGCCCGCAA GCAGCTGGTG CAATTGTTCG AGGCCTGGGG CCCGACCGAC GACGCCACCA TCGAGGGGCG CAAGCGGCTC TCGACCATTC TGTTCTCTTA A
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Protein sequence | MTIIEQGSGA APQAAPDLIK DTTTQTFVRD VIEESKLQPV LIDFWAPWCG PCRQLTPMLE KAVRAAGGKV KLVKMNIDEH PSIPGQMGIQ SIPAVIAFVD GRPADGFMGA VPESQVAAFI EKLTAGVPGG APTAAELLQE AEAVMAEGDL QTAGAIYAEV LRADAANVEA IVGLARCYMV SGAVDEAKAT LAQVPEARRE DAAVKAVQAM IDLAAQAEQV GPIAELEQKV AADPLDHQAR FDLATALNAA GRRDEATTHL LEIVRRDRKW NEDGARKQLV QLFEAWGPTD DATIEGRKRL STILFS
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