Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0277 |
Symbol | |
ID | 3907905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 311163 |
End bp | 312398 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882160 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_483899 |
Protein GI | 86747403 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.509616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA TTCGCGTTCC GACGCTCGGC GAATCCGTGA CCGAGGCGAC CATCGGCCGC TGGTTCAAGA AGCAGGGTGA CGCCGTCGCG GTCGACGAGC CGCTGGTCGA ACTCGAGACC GACAAGGTCA CCATCGAAGT GCCGGCGCCG TCGGCCGGCA CCCTCGGCGA AATCATCGCC AAGGACGGCG AGACCGTCGC CGTCGGCGCG CTGCTGGGCC AGATCTCGGA AGGGGGCGGT GCCGCCAAGC CCGCCGCGCC GGCCAAGCCG GCCGCCGCGC CGGCTGCCGC CGCTGCAGCG CCCGCTGCGG CCGCGCCCAA GGCCGCGCCG GCCGATGCGC CGCAGGCACC GTCGGTGCGG CGGCTGTCGA CCGAGAGCGG CGTCGATGCC TCGACCGTGC CGGGCTCCGG CAAGGACGGC CGCGTCACCA AGGGCGACAT GCTGGCGGCG ATCGAGAAGG CGGCGTCGGC GCCGACCCCG GTCAACCAGC CCGCCGCCGC CGTCCAGGTC CGCGCCCCGT CGCCGGCCGA CGATGCCGCG CGCGAGGAGC GCGTCAAGAT GACCCGGCTG CGCCAGACCA TCGCGCGCCG GCTCAAGGAA GTTCAGAACA CCGCCGCGAT GCTGACGACC TTCAACGAGG TCGACATGAC CAACGTCATG GCGCTGCGCA GCCAATACAA GGACGTGTTC GAGAAGAAGC ACGGCGCCAA GCTCGGCTTC ATGGGCTTCT TCACAAAGGC CTGCGTGCAA GCGCTGAAGG ACATCCCGGC GGTCAATGCC GAGATCGACG GCACCGATTT GATCTACAAG AACTACTACC ATGTCGGCGT CGCGGTCGGC ACCGACAAGG GCCTGGTGGT GCCGGTGGTG CGCGATTGCG ACGAGAAGTC GATCGCCGCG ATCGAGAAGG GCATTGCCGA TTTCGGCAAG CGCGCCCGCG ACGGCCAGCT CAAGATCGAG GAAATGCAGG GCGGCACCTT CACGATCACC AATGGCGGCA TCTACGGCTC GCTGATGTCG ACGCCGATCC TCAACGCGCC GCAGTCGGCG ATCCTCGGCA TGCACAAGAT CCAGGAGCGG CCGGTGGTCG TCGCCGGCAA GATCGAAATC CGGCCGATGA TGTATCTGGC GCTCAGCTAC GATCACCGCG TGATCGACGG CAAGGAAGCG GTGACCTTCC TGGTCCGCGT CAAGGAAAGC CTGGAAGACC CGGCCCGGCT GGTGCTGGAT CTGTAA
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Protein sequence | MTEIRVPTLG ESVTEATIGR WFKKQGDAVA VDEPLVELET DKVTIEVPAP SAGTLGEIIA KDGETVAVGA LLGQISEGGG AAKPAAPAKP AAAPAAAAAA PAAAAPKAAP ADAPQAPSVR RLSTESGVDA STVPGSGKDG RVTKGDMLAA IEKAASAPTP VNQPAAAVQV RAPSPADDAA REERVKMTRL RQTIARRLKE VQNTAAMLTT FNEVDMTNVM ALRSQYKDVF EKKHGAKLGF MGFFTKACVQ ALKDIPAVNA EIDGTDLIYK NYYHVGVAVG TDKGLVVPVV RDCDEKSIAA IEKGIADFGK RARDGQLKIE EMQGGTFTIT NGGIYGSLMS TPILNAPQSA ILGMHKIQER PVVVAGKIEI RPMMYLALSY DHRVIDGKEA VTFLVRVKES LEDPARLVLD L
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