| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0270 |
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| Symbol | |
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| ID | 3907898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 303801 |
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| End bp | 306008 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882153 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_483892 |
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| Protein GI | 86747396 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.521212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACT CTCCCACCAG CCCGGCCTCG CCCTCGGCAA TGCGCGTCGT CGACGTGCAG
GTGCCGGTCG CGATCGATCA GGCCTATTCG TACCGGGTGC CGCGCGGGCT CGAGCTGAAG
CCCGGCGACG TCGTCGCGGT GCCGCTCGGG TCGCGCGAGG TGATGGGGGT GGTCTGGGCC
GAGAACGAAA ATCCCGATCC GCGGCTGCAC AATCGCCTCA AGGATGTTGC CGAGAAGCTC
GACGTGCCGC CGCTGCGCGA GGAGCTGCGC CGGCTGGTCG ACTGGGTCGC CAATTACACG
CTGTCGCCGC GCGGCCAGGT GCTGCGGATG ACGCTGCGGA TGGGCGAACT CGGCCCGGAG
CGGGTGCGGA CGGGAGTCCG CCTGATCGGC CCCCCGCCGC AGCGGATGAC GCCGGCGCGG
CGGCGGCTGA TCGAGATCCT GTCCGACGGC CTGCTGCACG GCAAATCGGA CGCGGCGAAG
GAGGCGGGCT GCAGCGCCGG GGTGATCGAC GGGCTGGTCG ACGAGGGCAC GCTCAGCGTC
GAGCCGATGC CGCGCGAGCC GGCGGCGCCG ACGCCCGATC CGGATTTTGC GCCGGCGGAT
TTCTCGCCGG AGCAGGCGGC GGCGGCCGAG ACGATGCGCG AACTGGTCAA GTCCGGCGGC
GGCTTTCAGG CGGCGCTGCT CGACGGCGTC ACCGGCTCCG GCAAGACGGA AGTGTATTTC
GAGGCGGTCG CCGAAATCAT CCGCCAGGGG CGGCAGACGC TGATCCTGAT GCCGGAGATC
GCGCTGACCG GGCAATTCCT CGACCGCTTC GCGCTGCGCT TCGGCGTCCG GCCGCTGGAA
TGGCATTCTG AACTCACGCC GCGCACCCGC GCCCGCAACT GGGCGGCGAT CGCCGCCGGC
GAGGCGCAGG TGGTGGTCGG GGCGCGTTCG GCGCTGTTCC TGCCTTACGC CGATCTCGGG
CTGATCATCG TCGATGAGGA GCACGACCAG GCCTACAAGC AGGAGGACGG CGCGCATTAT
CACGCCCGCG ACATGGCGGT GGTGCGGGCG TCGATCGCGA AAATTCCGAT CGTGCTGGCC
TCGGCGACGC CGTCGGTCGA GACCGAGGTC AACGCCCGCA AGGGCCGCTA CAGGCGGATT
CCGCTGCCGT CACGATTCGG CGGCCAGCAC ATGCCGCAGA TCGAGGCGAT CGATCTGCGC
CGCGCGCCGC CGATGCGCGG GCGCTTCATC TCGCCGCCGC TGGCCGAGCA GATCGGCCAC
GCCATCGAAC GCGGCGAACA GGCGCTGCTG TTTCTCAACC GCCGCGGCTA TGCGCCGCTG
ACCTTGTGCC GGGCCTGCGG TCACCGCTTC GCCTGCACCA TCTGCGACGC CTGGCTGGTC
GATCACCGCT TCCGGCAGCG GCTGGTGTGC CACCATTGCG GCTTCTCGAT GCCGCGCCCG
CACCAATGCC CGCATTGCGG CGCCGAGGAA TCTTTAGTCG CAGTCGGGCC CGGCGTCGAA
CGGCTGCAGG AGGAGGCGGC CAGCCTGTTT CCGCAGGCGC GCACCATGGT GCTGTCGAGC
GACCTGATCA CCTCGATCGA GGCGATGCGC AGCGAACTCA ACGATATCGC CGAGGGCCGG
GTCGACATCA TCATCGGCAC CCAGCTTGTG GCGAAAGGTC ACAACTTCCC GCGGCTGAAC
CTGGTCGGTG TGGTCGATGC CGATCTCGGC CTGAGCAATG GCGATCCGCG CGCCGCCGAG
CGCACCTTCC AATTGCTCAA TCAGGTGATC GGCCGCGCCG GCCGCGATCA GGGCCGCGGC
GTCGGCTTTC TGCAGACGCA TCAGCCGGAG CATCCGGTGA TGAAGGCGCT GGTCGCGTGC
GACCGCGAGG CTTTCTATGC CAGCGAGATC GACGCCCGCG AACGCACGTT GTATCCGCCG
TTCGGCCGGC TCGCGAGCCT GATCGTGTCC GCCGGCGACC GGCCGAGTGC GGAAGGCTTT
GCGCGGAAGC TGGCGTCCTG CGCGCCGGTG GACGAGCGCG TCCAGGTGCT GGGACCGGCG
GAAGCGCCGC TGGCGGTGAT CAAAGGCCGC TATCGCTTTC GGCTGCTGGT GAAGTCGGTG
CGGTCGTTCG ATTTGTCGAA CTACTTGCGG TCATGGCTGG CGCAAGGACC GAAGACGAAA
GGAAACCTGA AGCTCGAGGT CGACGTCGAT CCGCAAAGCT TCCTGTAA
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| Protein sequence | MDDSPTSPAS PSAMRVVDVQ VPVAIDQAYS YRVPRGLELK PGDVVAVPLG SREVMGVVWA
ENENPDPRLH NRLKDVAEKL DVPPLREELR RLVDWVANYT LSPRGQVLRM TLRMGELGPE
RVRTGVRLIG PPPQRMTPAR RRLIEILSDG LLHGKSDAAK EAGCSAGVID GLVDEGTLSV
EPMPREPAAP TPDPDFAPAD FSPEQAAAAE TMRELVKSGG GFQAALLDGV TGSGKTEVYF
EAVAEIIRQG RQTLILMPEI ALTGQFLDRF ALRFGVRPLE WHSELTPRTR ARNWAAIAAG
EAQVVVGARS ALFLPYADLG LIIVDEEHDQ AYKQEDGAHY HARDMAVVRA SIAKIPIVLA
SATPSVETEV NARKGRYRRI PLPSRFGGQH MPQIEAIDLR RAPPMRGRFI SPPLAEQIGH
AIERGEQALL FLNRRGYAPL TLCRACGHRF ACTICDAWLV DHRFRQRLVC HHCGFSMPRP
HQCPHCGAEE SLVAVGPGVE RLQEEAASLF PQARTMVLSS DLITSIEAMR SELNDIAEGR
VDIIIGTQLV AKGHNFPRLN LVGVVDADLG LSNGDPRAAE RTFQLLNQVI GRAGRDQGRG
VGFLQTHQPE HPVMKALVAC DREAFYASEI DARERTLYPP FGRLASLIVS AGDRPSAEGF
ARKLASCAPV DERVQVLGPA EAPLAVIKGR YRFRLLVKSV RSFDLSNYLR SWLAQGPKTK
GNLKLEVDVD PQSFL
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