Gene RPB_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0240 
Symbol 
ID3907867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp272790 
End bp273419 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID637882122 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_483862 
Protein GI86747366 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG TCGCCGCCGC CCCGCAGGCC GCAGAGCCGG TGTTCCACGT CGTCGACGAG 
CATGCCCATC CGGAAGGCGC GAGCACGATG CTCGGCTTCT GGATCTACCT GATGAGCGAT
TGTCTCATCT TCGCGATCCT GTTCGCCACT TATGGCGTGC TCGGCGCCAA TTACGCGGCC
GGTCCGGCGC CGAAGGACCT GTTCGATCTG AAGCTGGTCG CGGTCAACAC CGCGATGCTG
CTGATGTCGT CGATCACCTA CGGCTTCGCC ATGCTGACGA TGGAGAAGCG GCAGGTCGGC
GCCACGCTGG CCTGGCTCGG CGTCACCGGC CTGTTCGGAC TCGCCTTCCT CGGCATCGAA
CTCTACGAGT TCCACCACAT GATTCACGAG GGCGCGACGC CGCAGCGCAG CGCCTTCCTG
TCGTCGTTCT TCACGCTGGT CGGCACCCAC GGCCTGCACG TCACGTTCGG CATCATCTGG
CTGGTGACGC TGATGGTACA GGTCGCGCGT GCCGGCCTGA TCGAAGCCAA CCGCCGGCGG
CTGATGTGCC TCAGCATGTT CTGGCACTTC CTCGACGTGG TGTGGATCGG CGTGTTCACC
TTCGTCTATC TGCTGGGAAC CTTGCGATGA
 
Protein sequence
MSVVAAAPQA AEPVFHVVDE HAHPEGASTM LGFWIYLMSD CLIFAILFAT YGVLGANYAA 
GPAPKDLFDL KLVAVNTAML LMSSITYGFA MLTMEKRQVG ATLAWLGVTG LFGLAFLGIE
LYEFHHMIHE GATPQRSAFL SSFFTLVGTH GLHVTFGIIW LVTLMVQVAR AGLIEANRRR
LMCLSMFWHF LDVVWIGVFT FVYLLGTLR