Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0237 |
Symbol | |
ID | 3907864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 270206 |
End bp | 271519 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882119 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_483859 |
Protein GI | 86747363 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.349779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCGT CCACATTCGT GCCGCGCCTC GGTGACGTGA CTCCGGGCGA CGATGCGACC GACCGCAAGA ACATGGCGCT GCTGATCCAG CTCCGCTGGA CCGCGGTGAT CGGTCAGATC GTCACCATCG GCGCGGTGCA TTTGTGGCTC GGTGCCCCAT TGCCGCTCGT GCCGATGGGC GCCGTCGTGC TCGGGCTGAT CGCGCTCAAT ATCGCGAGCC TGGCATGGAT GCGCTATCGC GTCGCGATCA GCAATCGCGA CCTGCTGGTC GCGCTGATCC TCGATGTCGT CGCGCTGACC GCTCTGCTTT ATCTCAGCGG CGGCATCACC AATCCGTTCA CCTCGCTGTA TCTGCTGCAG GTGACGCTCG GCGCGGTGCT GCTCGACAGC CGCTCGAGCT GGTCGCTGGT GGCCGTCGTG TTCACGGCTT TCATCTGGCT GACCGAAGCA TCGCGCCCGC TGGTGCTGCC GCCGGCCGCC GGCGATCCGG TCAATCTCGC CGTCGCCGGC ATGCTGATTG GCTTCGCGCT GAATGCCGTG CTGTTGGTGG TGTTCGTCAC GCGGATTCAT CGCAATCTGC GCGAGCGCGA CGCGCATCTG GCGGCGTTGC GCCAGCATGC TGCGGAGCAG GACCACATCG TGCGCATGGG CCTGCTCGCC TCCGGCGCCG CGCACGAACT CGGCACGCCG CTGGCGTCGG TGTCGGTCAT TCTCAGCGAT TGGCGCCGGA TGCCGCAGAT CATGGCCAAT CGTGAGATTG CCGAAGACCT CGCCGAAATG GAGACGGCGC TGAAGCGTTG CCAATCGATC GTCACCGGGA TTCTGGTGTC GGCCGGCGAG GCGCGCGGTG AGGGATCGTC ACCGACCACG GTGTCGGCGT TCCTGTCGGC GCTCGCCGAG GAATGGCAGA ATGCGCGATG CAAGACCACG CTGCACGTCG TCAACGTCTT CGGCGAGGAC GTGCCGATCG TTTCGGACGT CACGTTGAAG CAGGCGATCT TCAACGTGTT GGACAATGCG TTCGAAGTGT CGCGCTACTG GATCGAGCTG GTTGCAGAGC GCGACGGCGA CAATCTGGTG CTGTCGATCA GCGATCGCGG TCCCGGTTTT CCGAAGGACA TGCTGACGCA GATCGGCAAG CCGTATCAGT CGAGCAAGGG CCGGGCCGGC GGCGGCCTAG GCCTGTTCCT GGTCATGAAC GTCGTGCGCA AGCTCGGCGG CTCGATCACC GCGGAAAACC TCCGCACCCG CGGCGCCAAG GTCAAGCTGG TGCTGCCGCT TTCGACACTC GCGATCGGAA ATCCATTTGA TTGA
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Protein sequence | MSASTFVPRL GDVTPGDDAT DRKNMALLIQ LRWTAVIGQI VTIGAVHLWL GAPLPLVPMG AVVLGLIALN IASLAWMRYR VAISNRDLLV ALILDVVALT ALLYLSGGIT NPFTSLYLLQ VTLGAVLLDS RSSWSLVAVV FTAFIWLTEA SRPLVLPPAA GDPVNLAVAG MLIGFALNAV LLVVFVTRIH RNLRERDAHL AALRQHAAEQ DHIVRMGLLA SGAAHELGTP LASVSVILSD WRRMPQIMAN REIAEDLAEM ETALKRCQSI VTGILVSAGE ARGEGSSPTT VSAFLSALAE EWQNARCKTT LHVVNVFGED VPIVSDVTLK QAIFNVLDNA FEVSRYWIEL VAERDGDNLV LSISDRGPGF PKDMLTQIGK PYQSSKGRAG GGLGLFLVMN VVRKLGGSIT AENLRTRGAK VKLVLPLSTL AIGNPFD
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