| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0174 |
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| Symbol | |
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| ID | 3907779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 188622 |
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| End bp | 189902 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637882056 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_483797 |
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| Protein GI | 86747301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.396862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGAA CCTGGATGGC AGCGGCGGCT TTCACGCTCG CCGCCGGCTG CGCTCACGCG
CAGACGCAGA CCGAAGTCGT GCTGCAATAT CCCTATCCGG AGCTGTTCAC CGAGACCCAC
AAGCAGATCG CGGCCGAATT CGCCAAGGTG CATCCGGAAA TCAAGGTGAC GTTCCGCGCG
CCTTACGAAT CCTATGAAGA AGGCACCCAG AAGGTGCTGC GCGAGGCGGT CACCAATCAG
GTCCCCGACG TCACCTTCCA GGGCCTGAAC CGCGTCCGCG TGCTGGTCGA CAAGAACATT
CCGGCCGAAC TCGACGGCTA CATCGCCGCC GAAAAGGATT TCGACAAGCA GGGCTTCCAC
CAGGCGATGT ACGACATCGG CACCGCCAGC GGAAAGGTCT ACGCGCTGCC GTTCGCGATC
TCGCTGCCGA TCGTCTACGT CAATGTCGAT CTGGTGAAAC AGGTCGGCGG CGATCCGAAC
AATCTGCCGA CCAGCTGGGA CGGCCTGATC GACCTCGCCA AGAAGGTCAA GGCGCTCGGC
CCGGACTATA ACGGCATCAC CTATGCGTGG GACATCACCG GCAACTGGCT GTGGCAGGCG
CCGGTGTTCG CCCGCGGCGG CACCATGCTG AACGCGGACG AAACCAAGGT GGCGTTCGAT
GGTCCCGAAG GCCAGTTCGC CATGAAGCAG ATCGCCCGCC TCGTCACCGA GGGCGGCATG
CCGAATCTCG ACCAGCCGTC GATGCGCGCC GCCTTCGCGG CGGGCAAGAC CGGCATCCAC
ATCACCTCGA CCTCCGATCT CAACAAGACC ACGCAGATGA TCGGCGGCAA GTTCACGCTG
AAGACCCACA TCTTCCCGGA CGTGGTCAAG CCGAACGGCC GTCTGCCGGC CGGCGGCAAC
GTGGTGCTGA TCACCGCCAA GGACAAGGCC AAGCGTGACG CGGCCTGGGA AGTGGTGAAG
TTCTGGACCG GCCCGAAGGG CGCCGCGATC ATGGCGGAGA CCACCGGCTA CATGCCGCCC
AACAAGGTCG CCAACGACGT CTATCTGAAG GACTTCTACG AGAAGAACCC GAACAACTAC
ACCGCGGTGA GCCAGCTCGC GCTGCTGACC AAATGGTACG CGTTCCCGGG CGACAACGGC
CTCAAGATCA CCGACGTGAT CAAGGATCAT CTCAACTCGA TCGTGACCGG AACCCGGGCC
AAGGAGCCGG ACGCGGTGCT CGCCGACATG ACCAAGGACG TGCAGAAGCT GCTGCCGAAA
TCGGTCGGCG CGGCGCGCTG A
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| Protein sequence | MLRTWMAAAA FTLAAGCAHA QTQTEVVLQY PYPELFTETH KQIAAEFAKV HPEIKVTFRA
PYESYEEGTQ KVLREAVTNQ VPDVTFQGLN RVRVLVDKNI PAELDGYIAA EKDFDKQGFH
QAMYDIGTAS GKVYALPFAI SLPIVYVNVD LVKQVGGDPN NLPTSWDGLI DLAKKVKALG
PDYNGITYAW DITGNWLWQA PVFARGGTML NADETKVAFD GPEGQFAMKQ IARLVTEGGM
PNLDQPSMRA AFAAGKTGIH ITSTSDLNKT TQMIGGKFTL KTHIFPDVVK PNGRLPAGGN
VVLITAKDKA KRDAAWEVVK FWTGPKGAAI MAETTGYMPP NKVANDVYLK DFYEKNPNNY
TAVSQLALLT KWYAFPGDNG LKITDVIKDH LNSIVTGTRA KEPDAVLADM TKDVQKLLPK
SVGAAR
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