Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0159 |
Symbol | |
ID | 3907764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 171281 |
End bp | 172048 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882041 |
Product | hypothetical protein |
Protein accession | YP_483782 |
Protein GI | 86747286 |
COG category | [S] Function unknown |
COG ID | [COG3336] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.673519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC CCTATTGCGG CGCAGCGCCG CTTCCCGCTG AACTTTTGAG CCGATGGAAT GTCGATCCGG TGCTGCTGGT GGCGCTCGGC GGCGGTTGTG TGCTGCATCT CGGCCTGCTG TGGCGCGAGC GCGAAGGCGA TCGGCGCAGC CGCATGGCGT CGGCGGCGAC CGCCTGGGCG CTGTTGTTCG CGCTGTTCGT GTCGCCGCTG TGTGCGCTGA CCTCGGCGCT GTTTTCCGCG CGGGTCGCGC ATCATGCCGT GATGGTCGCA ATTGCGGCGC CGTTGCTGGC GTGGTCGCTG CCGCGCCGGC TTGTGCCACA AAGACTCGGA GCCGCGTCCG GCAGCGCGGC GTTCGTGGTG CATCTGGTGC TGCTGTGGCT GTGGCACGCG CCGGCGCCCT ACGTCGCGGC GCTGGCCGAT CCGGCGATGT TCTGGGTGAT GGAGCTGAGC CTGCTGGGCA GCGCGATGTG GCTGTGGAGC GCGGTGCTGT CGCCGGCGAC GCGGCTCGGC ACCACGCTGG CGCTCTTGCT CGGCTCGGTG GTGCAGATGG GGTTGCTCGG CGCCGTCATC ACTTTCGCGC GGACGCCGCT GTACGAGGCG CATCTCGGCG TCACCGCGCC CTGGGGGCTG ACCGCGCTGC AGGATCAGCA GCTCGCCGGG CTGATCATGT GGGTGCCGGC ATCGATTCCC TATTTGGCGG CGGCGTTGGC GCTGCTGGCG AGCCGTCTCG ACCAGCCTGT CGCGACAATC GATGAAGCGG TGCGATGA
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Protein sequence | MINPYCGAAP LPAELLSRWN VDPVLLVALG GGCVLHLGLL WREREGDRRS RMASAATAWA LLFALFVSPL CALTSALFSA RVAHHAVMVA IAAPLLAWSL PRRLVPQRLG AASGSAAFVV HLVLLWLWHA PAPYVAALAD PAMFWVMELS LLGSAMWLWS AVLSPATRLG TTLALLLGSV VQMGLLGAVI TFARTPLYEA HLGVTAPWGL TALQDQQLAG LIMWVPASIP YLAAALALLA SRLDQPVATI DEAVR
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