Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0157 |
Symbol | |
ID | 3907762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 170344 |
End bp | 170826 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882039 |
Product | hypothetical protein |
Protein accession | YP_483780 |
Protein GI | 86747284 |
COG category | [S] Function unknown |
COG ID | [COG4244] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.486831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGA CGATTCTCGA AGAAGTCCGC GCTTACGACA CCAATTCGAT CGTGGCCCTC GCCGGCCATC CGATCCACGC CATGATGGTC TCGTTTCCGA TCGCGCTGGT GATCGCGACG CTCGGCTGCG ACATCTTCTA CTGGTGGGGC GGCGATCCGT TCTGGGCGCG CGCCGGGCTG TGGGCCAGCG GCTTCGCGTT CTGGCTCGGC GTCGCCGCCA GTCTCGCCGG CACCGCGGAA CTGCTGCTGG TCGAGGGCAT ACGCAAGCGC GCGGCGAGCT GGATGCACGC CATCGCCGGG GTGATGCTGG TGTCGATCGC CGGCGCCAAT TGGGGTCTGC GGCTGGTCGA CCACGAGAAC GTGCTGCCGG TCGGCCTGAT GGTGTCGGCG CTGGGCTCGG TGTTCGTCGG CATCGCCGGC TGGCACGGCG GCAAGCTGGT GTTCGATCAC GGCATCGGCC TGATGGTCTC GACGAAGGAC TGA
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Protein sequence | MPKTILEEVR AYDTNSIVAL AGHPIHAMMV SFPIALVIAT LGCDIFYWWG GDPFWARAGL WASGFAFWLG VAASLAGTAE LLLVEGIRKR AASWMHAIAG VMLVSIAGAN WGLRLVDHEN VLPVGLMVSA LGSVFVGIAG WHGGKLVFDH GIGLMVSTKD
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