Gene RPB_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0157 
Symbol 
ID3907762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp170344 
End bp170826 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID637882039 
Producthypothetical protein 
Protein accessionYP_483780 
Protein GI86747284 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.486831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA CGATTCTCGA AGAAGTCCGC GCTTACGACA CCAATTCGAT CGTGGCCCTC 
GCCGGCCATC CGATCCACGC CATGATGGTC TCGTTTCCGA TCGCGCTGGT GATCGCGACG
CTCGGCTGCG ACATCTTCTA CTGGTGGGGC GGCGATCCGT TCTGGGCGCG CGCCGGGCTG
TGGGCCAGCG GCTTCGCGTT CTGGCTCGGC GTCGCCGCCA GTCTCGCCGG CACCGCGGAA
CTGCTGCTGG TCGAGGGCAT ACGCAAGCGC GCGGCGAGCT GGATGCACGC CATCGCCGGG
GTGATGCTGG TGTCGATCGC CGGCGCCAAT TGGGGTCTGC GGCTGGTCGA CCACGAGAAC
GTGCTGCCGG TCGGCCTGAT GGTGTCGGCG CTGGGCTCGG TGTTCGTCGG CATCGCCGGC
TGGCACGGCG GCAAGCTGGT GTTCGATCAC GGCATCGGCC TGATGGTCTC GACGAAGGAC
TGA
 
Protein sequence
MPKTILEEVR AYDTNSIVAL AGHPIHAMMV SFPIALVIAT LGCDIFYWWG GDPFWARAGL 
WASGFAFWLG VAASLAGTAE LLLVEGIRKR AASWMHAIAG VMLVSIAGAN WGLRLVDHEN
VLPVGLMVSA LGSVFVGIAG WHGGKLVFDH GIGLMVSTKD