Gene RPB_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0087 
Symbol 
ID3908729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp93756 
End bp93977 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content70% 
IMG OID637881968 
Producthypothetical protein 
Protein accessionYP_483710 
Protein GI86747214 
COG category[S] Function unknown 
COG ID[COG5508] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.41867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.216691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT CCGATCCGCA GCCCGTGCCG GCGGCGCCGA CCGAACCGCC GCGGCGGGAA 
CTGCCTGACG CCGCAAAGCG CGCGCTGGCC GAAGCCGATG CCCGGCGGGT CGAAGCCGCG
CAACACGCCG CCGCGCGCGC CAAGGAGTAT CAGGGTCCGA AAGGCCCCGA ACCGACCCGC
TACGGCGACT GGGAAGTCAA AGGCATCGCG TCGGATTTCT GA
 
Protein sequence
MTKSDPQPVP AAPTEPPRRE LPDAAKRALA EADARRVEAA QHAAARAKEY QGPKGPEPTR 
YGDWEVKGIA SDF