| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0086 |
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| Symbol | |
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| ID | 3908728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 92238 |
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| End bp | 93590 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881967 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_483709 |
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| Protein GI | 86747213 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.247728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC CAAGATTCGC ACAGCCGTCG GAGGTGCCCG GACTGGCAGC GCGCCGGATC
GCCGCCGACA TCCTCGACGG CGTCCTGCAG AAGCGCCGGA TGCTGGACGA CCAGCTCGAA
GGCCCCGCCG CACATCCCGG GCTCAAGACG CTGCCGGATC GTGACCGCGC GCTGATGCGC
CGGCTGGTGG CGACCATTCT GCGCCGGCTC GGCACGCTCG AACATCTGCT GGCGCGGATG
CTCGATCGCG GGGTTCCGAC CGATGCGCCG CGCGCCAAGA GCGCGCTCTT GATCGGCGCC
GCGCAGATCC TGTGGATGGA TGTTCCGGAC CACGCCGCCG TCGATCTGTC GGTGCGGCTG
GTGCAGTCCG ACCGCCGTGC CGCCAAATAT GCCGGCCTTG TCAACGCCGT GCTGCGGCGC
TGCGCGCGCG AGGGGCATCC CTTGATCGAC GCGGTCGCGG GCCAGGCGCT CGACGTGCCG
GAATGGCTGA TGGCGCGGTG GCGCGCGCAT TACGGCGACG ACGCCGCCAA GGCGATCGCG
CTTGCGATCA GCCATGAGCC GTCGCTCGAC ATCACCGTCA AATCCGATCC CGACCATTGG
GCCGGGCGGC TGTATGGCGA ATTGCTGCCG ACCGGCACGG TGCGGACGCT GCTGCAGGGC
TCGGTGAAGA TGCTGCCGGG CTTCGACGAC GGCCAATGGT GGGTGCAGGA TGCCGCCGCC
GCTTTGCCGG CGCGGCTGTT CGGCGATCTC GCCGGCAAAT CGGTGGCCGA TCTCTGCGCC
GCACCGGGCG GCAAGACCGC GCAACTGGCG CAGGCCGGCG CGCGGGTCAG CGCGATCGAT
CGCTCGCCGG CGCGGGTGGC GCGGTTGCGC GAAAATCTGG CGCGGCTGGG ACTCGAGGCC
GAGACCGCCG TGGCTGACGC CACCGAATGG CGCAGCGATG CCCCCGGCAG TTTCGACGGC
GTGCTGGTCG ACGCCCCCTG CGCCTCGACC GGCACCATCC GCCGGCATCC CGATGTCGCC
TGGCTGAAGC AGGAGAGCGA CATCGGCGCG CTGTCGGCGG TGCAGAGCCG GCTGCTGCAC
AAGGCGGTCG CGCTGCTCAA GCCGGGCGGC ACGCTGGTCT ATTGCACCTG TTCGCTGGAG
CCGGAGGAAG GCGAGCAGGT GGTCGGCGCG CTGTTGGACG CCGAGCCCGG GATGCGGCGC
CTCCCGGTGG AGCCCGCCGA GGTTGCCGGC CTTGCCGAGA TCGTGACCGC CGAGGGCGAT
GTTCGGACCC TGCCGTCGCA TCTGCCCCAT GCTGATCCGA GGCTCGCGGG GTTCGATGGG
TTCTACGCCG CCCGTCTTAC GAAGTCTTTG TAA
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| Protein sequence | MPAPRFAQPS EVPGLAARRI AADILDGVLQ KRRMLDDQLE GPAAHPGLKT LPDRDRALMR
RLVATILRRL GTLEHLLARM LDRGVPTDAP RAKSALLIGA AQILWMDVPD HAAVDLSVRL
VQSDRRAAKY AGLVNAVLRR CAREGHPLID AVAGQALDVP EWLMARWRAH YGDDAAKAIA
LAISHEPSLD ITVKSDPDHW AGRLYGELLP TGTVRTLLQG SVKMLPGFDD GQWWVQDAAA
ALPARLFGDL AGKSVADLCA APGGKTAQLA QAGARVSAID RSPARVARLR ENLARLGLEA
ETAVADATEW RSDAPGSFDG VLVDAPCAST GTIRRHPDVA WLKQESDIGA LSAVQSRLLH
KAVALLKPGG TLVYCTCSLE PEEGEQVVGA LLDAEPGMRR LPVEPAEVAG LAEIVTAEGD
VRTLPSHLPH ADPRLAGFDG FYAARLTKSL
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