Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0083 |
Symbol | |
ID | 3908725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 86769 |
End bp | 88157 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881964 |
Product | major facilitator transporter |
Protein accession | YP_483706 |
Protein GI | 86747210 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.339646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.26187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCAT CGACCGCGGC GGACCACTCG CGAGAGAGTG TGCCGAGAAC CTATCCGTCG CGCGCCGCGG TCGGCGGCTG GATCCTGTTC GACTGGGCGG CGCAGCCCTA TTTCACGCTG ATCACCACCT TCATCTTTGC GCCCTATTTC GCCACTTACG TCGCGCCCGA TCCCGCCACC GGGCAATCGC TGTGGGGCTT CGCGACGGCG GCGAGCGGGC TGTTGATTGC TTTGGCCTCG CCGATCCTCG GCGCGGTCGC CGATGCGAGC GGCCGGCGCA AGCCGTGGAT CGCGGTGTTC GGCGCGATGC TGGTGATCGG CTCGTCACTG ATGTGGTTCG GCCGGCCGGG CGATGCCGGC GTGATCCTGC CGCTGCTGAT CGCCTACGCG ATCGCGACCA TCGGGGTCGA ATTCGCCACC GTGTTCAACA ACGCGATGAT GCCGAACCTG GTGCCGCCGG AGAAAATCGG CCGGCTGTCC GGCACCGGCT GGGCCACCGG CTATGTCGGC GGCATTCTCT CGCTGATTCT CGTGCTCGGC TTCCTCGCCG CCAACCCGCA GACCGGCAAG ACGCTGATCG GCGTCACGCC GCTGTTCGGG CTCGACGCGG CGAGCCACGA GGGCGACCGC ATCACCGGCC CGCTCACCGG GCTGTGGTTT ATGGTGTTCG TGCTGCCGAT GTTTCTGCTG ACGCCGGATT TTCCGGCCAA GCTGTCGGTG AAGGCGGCGG TCGGCGAGGG CCTGCGCGAA TTGCGCGAGA CGCTGCGCGA CCTGCCGCAG CGGCGCTCGC TCGCCTCCTT CCTGCTCGCC AACATGATCT ACACCGACGG GCTCGTCTCG CTGTTCGCCT TCGGCGGCAT CTACGCCACC GGCACGTTCG GCTGGGGCAC CATCCAGATC GGCAGCTTCG GCGTGATTCT GGCGATCGCC GCGACCTTCG GGGCGTTCAT CGGCGGCCGG CTTGACGACG CGCTCGGATC GAAGCGCGTG ATCGCCGGAT CGATCGTGCT GCTGCTGATC GCGATCAGCG GCATCCTGCT GATCGATCCG TCGCATATCC TGTTCGTCGA GGTGACGCCG CCGCAGCCGG GCGGCGCTCT GTTCGCCGCC CCCGCCGAGC GCGCTTATCT GCTGCTCGGC TGCCTGATCG GCATCGCCGG CGGGCCGCTG CAGGCGGCGT CGCGGACGCT GCTGATCCGC ATCGCCCCGC GCGACCGCAT CGCGCAATAT TTCGGCCTGT TCGCGCTGAC CGGCAAGGTC ACGTCGTTCG TCGGCCCGCT GCTGATCGCC ACCGTCACCG CCATCACCGC GAGCCAGAAG GCCGGCATGG CGGTGCTGGT GCTGTTCTTC GTCGGCGGCC TGGCGCTGCT GACGCGGGTG CGGAATTAG
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Protein sequence | MTSSTAADHS RESVPRTYPS RAAVGGWILF DWAAQPYFTL ITTFIFAPYF ATYVAPDPAT GQSLWGFATA ASGLLIALAS PILGAVADAS GRRKPWIAVF GAMLVIGSSL MWFGRPGDAG VILPLLIAYA IATIGVEFAT VFNNAMMPNL VPPEKIGRLS GTGWATGYVG GILSLILVLG FLAANPQTGK TLIGVTPLFG LDAASHEGDR ITGPLTGLWF MVFVLPMFLL TPDFPAKLSV KAAVGEGLRE LRETLRDLPQ RRSLASFLLA NMIYTDGLVS LFAFGGIYAT GTFGWGTIQI GSFGVILAIA ATFGAFIGGR LDDALGSKRV IAGSIVLLLI AISGILLIDP SHILFVEVTP PQPGGALFAA PAERAYLLLG CLIGIAGGPL QAASRTLLIR IAPRDRIAQY FGLFALTGKV TSFVGPLLIA TVTAITASQK AGMAVLVLFF VGGLALLTRV RN
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