Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0080 |
Symbol | |
ID | 3908722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 82852 |
End bp | 83667 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637881961 |
Product | hypothetical protein |
Protein accession | YP_483703 |
Protein GI | 86747207 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.141952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCT GCCTTGCCGC CTTCGTCGCG TTGTTCGCCG TGCTGTCGTC GCCGGCGCTG GCCGAGGACG GCTTCCGCGG CAGCGAGTGT CTGGCGATGG CGCAAGCGCC GCCGCGCGCG GTGCCGGTCA GCCTGCGGCG GACGGCTGCG GCCGAGCAGG TGCTGATCAC CTATCGCGGG CACTCGACCT ACACGATCGA AACCCCCGGC GGCGTGATGA TCGCCACCGA CTACAACGGC GCCTACGCTA CCGGCCGCGT ACCGGACGTC GTCACCATGA ACCGCGCGCA TTCGACGCAC TACACGCTGG CGCCCGACCC GAAGATCGCG CATGTGCTGC ACGGCTGGGG CGACGACGGC CAGCCGGCGC ATGTCCGGTT GCGCGTCGGC GACGTGATGA TCCGCAACGT CACCACCGAC ATCCGCCGCT ATATGTTCGA CGACGGCAAT GCCGGCATGA TCAAGGACGG CAATTCGATC TTCATCTTCG AGGTCGCGGG CCTGTGCATC GGCCATCTCG GTCATCTGCA CACCACGCTC GACGACAGCC ATTTCGCCGC GATCGGCCGG ATCGACATTC TGATGGTGCC GATCGACGGC AGCTACACGA TGTCGCTCGA TGGCATTTCG GCGATCACCA AGCGGCTGCG CGCCGCGGTG GTGCTGCCGA TGCACCGCTT CATGACGCCG CTCGACGAGT TCATGCGGCG CATCGGCCAA TCGTTCGCGA TCGATCAGCG CGGCGACAGC GCCCTGCGGA TATCGCGGGA GACACTGCCG GGCGCGCCGA CGGTGATCAT TCTGCGGGGG GTATAG
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Protein sequence | MLRCLAAFVA LFAVLSSPAL AEDGFRGSEC LAMAQAPPRA VPVSLRRTAA AEQVLITYRG HSTYTIETPG GVMIATDYNG AYATGRVPDV VTMNRAHSTH YTLAPDPKIA HVLHGWGDDG QPAHVRLRVG DVMIRNVTTD IRRYMFDDGN AGMIKDGNSI FIFEVAGLCI GHLGHLHTTL DDSHFAAIGR IDILMVPIDG SYTMSLDGIS AITKRLRAAV VLPMHRFMTP LDEFMRRIGQ SFAIDQRGDS ALRISRETLP GAPTVIILRG V
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