Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0076 |
Symbol | |
ID | 3907816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 77432 |
End bp | 79699 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881957 |
Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
Protein accession | YP_483699 |
Protein GI | 86747203 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.48505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.113243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAGCA CGTCGGGCGG CCCCCGCGTC TTGCTGAGAC GGCTCCGTGA AACCATGGCG GAGCAAGTCT CCGCGCAGGA ACGCCTGGAC AAGATCGTGG TGCTGATCGC CGCCAATATG GTGGCGGAGG TGTGCTCGAC CTACGTCCTG CGGGTCGACA ATACGCTCGA ACTCTACGCC ACCGAAGGCC TCAACCGCGA GGCGGTGCAC CAGACCGTGC TGACCGCGCA TGAAGGCCTG GTCGGCCTCG TCGCCTCCGA GGCGACGCCG CTGAATCTCT CCGACGCGCA GAGCCATCCG GCGTTCTCGT TCCGCCCGGA GACCGGCGAA GAAATCTATC ACTCCTTCCT CGGCGTGCCG ATTCTGCGCG CCGGCAACAC GCTCGGCGTG CTGGTGTTGC AGAACCGCGC CAAGCGCACC TATGTCGAGG AAGAGGTCGA GGCGCTGCAG ACCACCGCGA TGGTGCTCGC CGAAATGATC GCCTCGGGCG AATTGTCGGC GCTGGCGCAG CCCGGCGCCG AGCCCGCGGC ACGGCACTCG ATCCACAAGA CCGGCGCGAT CCTGTCCGAC GGCATCGCGC TCGGCCATGT CGTGCTGCAC GAGCCGCGCG TCGTCATCAC CAACTACATC GCCGAGGATC TGCCGAAGGA AATCAGGCGG CTCGACACCG CTTTGGCCAA TCTGCGCGCC GATCTCGACC GTCTGCTGGA GCGCGGCGAC GTCGCCGACG GCGGCGAGCA TCGCGACGTG CTCGAAGCCT ACCGGATGTT CGCCAACGAC CACGGCTGGT CGCACAAGCT GCACGAGGCG GTGGCCACCG GCCTCACCGC GGAAGCCGCC GTCGAGCGCG TGCAGTCCGA CACACGGGCC CGGATGCTGC GCTCGACCGA TCCGTATTTG CGCGACCGGC TGCACGATCT CGAGGACCTC GGCCACCGGC TGATGCGCCA GCTGGTCGGC CAGAATCACG CACCGTCCCG CGAGCAATTG CCCGACAACG CCATCCTGAT CGCGCGCTCG ATGGGCCCGG CGGCGCTGCT CGACTACGAC CGCAAGAGGC TGCGCGGCCT GGTGCTCGAA GAGGGCACCG CGAATTCGCA CGTCTCGATC GTGGCGCGCG CGCTCGGCAT TGCGGCGATC GGCGAAGTGC CGAACGCGCC GGGCATCGCC GATCCGGGCG ACGCGATCAT CGTCGATGCC ACCTCCGGCT CGATCTATGT CCGCCCCTCC GCGGAGGTCG AGGCCGCCTA TGCCGAGCGG GTGCGCTTTC GCGCGCGGCG CCAGGCGCAG TATTCCGCGC TGCGCGATCT CGCCTGCGTC ACCACCGACG GCCAGCCGAT CGACCTGATG ATCAATGCCG GTCTGGCGAT CGACCTGCCG CATATCGACG ACACCGGCTC GTCCGGCGTC GGCCTGTTCC GCACCGAGCT GCAGTTCATG ATCGGCCAGA GCCTGCCGCG CTCCAGCGAT CAGCTCGCGC TGTACCGCGC CGTGCTCGAT GCCGCGGGAT CCAAGCCGGT GACCTTCCGC ACGCTCGATA TCGGCGGCGA CAAGGCGCTG CCCTATATGG AAACCGTGGT CGAGGAGAAT CCTGCGCTCG GCTGGCGGGC GATCCGGCTC GGGCTGGACC GGCCGGGCCT GCTGCGCAGC CAGATCCGGG CGCTGTTGCG CGCCGGCGGC GGGCGCAATC TGCGCATCAT GTTTCCGATG ATCTCGGAAG TCGCCGAATT CGACGCCGCC AAGGCGATCG TCGAGCGCGA ACTGACCTAT CTGCGCCAGC ACGGCCACAC GCTGCCGGAG CGGGTCGACG TCGGCACCAT GGTCGAAGTG CCGGCGCTGC TGTATCAGCT CGACGAACTG TTCAAGAAGG TCGACTTCAT TTCGGTCGGC TCCAACGATC TGTTCCAGTT TTTGTATGCG GTCGACCGCG GCAACGCCAA GGTGTCGGAC CGCTTCGACA CACTGTCGGC CCCCATCCTG CGGGCGCTGC GCGACATCGT GCGCAAGGCC AAGGCCGCCA AGCGCTCGGT GTCGCTGTGC GGCGAGATGG CGTCGCAGCC GCTGGGGGCG CTGGCGCTGA TCGCGATCGG CTATCGGGCG CTGTCGGTGT CGGCGGTGTC GCACGGCCCG GTCAAGGCGA TGATCCTCGA ACTCGACGCT GCCAAGGCCG AGGCGGCGAT CTCGCCGTTG CTCGATGCGC CCGCCGGCAG CGTCTCGATC CGGCACAAGC TCGCGGAATT CGCCGAGGCT CACGGGCTGT CCTTGTAG
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Protein sequence | MRSTSGGPRV LLRRLRETMA EQVSAQERLD KIVVLIAANM VAEVCSTYVL RVDNTLELYA TEGLNREAVH QTVLTAHEGL VGLVASEATP LNLSDAQSHP AFSFRPETGE EIYHSFLGVP ILRAGNTLGV LVLQNRAKRT YVEEEVEALQ TTAMVLAEMI ASGELSALAQ PGAEPAARHS IHKTGAILSD GIALGHVVLH EPRVVITNYI AEDLPKEIRR LDTALANLRA DLDRLLERGD VADGGEHRDV LEAYRMFAND HGWSHKLHEA VATGLTAEAA VERVQSDTRA RMLRSTDPYL RDRLHDLEDL GHRLMRQLVG QNHAPSREQL PDNAILIARS MGPAALLDYD RKRLRGLVLE EGTANSHVSI VARALGIAAI GEVPNAPGIA DPGDAIIVDA TSGSIYVRPS AEVEAAYAER VRFRARRQAQ YSALRDLACV TTDGQPIDLM INAGLAIDLP HIDDTGSSGV GLFRTELQFM IGQSLPRSSD QLALYRAVLD AAGSKPVTFR TLDIGGDKAL PYMETVVEEN PALGWRAIRL GLDRPGLLRS QIRALLRAGG GRNLRIMFPM ISEVAEFDAA KAIVERELTY LRQHGHTLPE RVDVGTMVEV PALLYQLDEL FKKVDFISVG SNDLFQFLYA VDRGNAKVSD RFDTLSAPIL RALRDIVRKA KAAKRSVSLC GEMASQPLGA LALIAIGYRA LSVSAVSHGP VKAMILELDA AKAEAAISPL LDAPAGSVSI RHKLAEFAEA HGLSL
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