Gene RPB_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0076 
Symbol 
ID3907816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp77432 
End bp79699 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content68% 
IMG OID637881957 
Productphosphoenolpyruvate-protein phosphotransferase PtsP 
Protein accessionYP_483699 
Protein GI86747203 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.48505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGCA CGTCGGGCGG CCCCCGCGTC TTGCTGAGAC GGCTCCGTGA AACCATGGCG 
GAGCAAGTCT CCGCGCAGGA ACGCCTGGAC AAGATCGTGG TGCTGATCGC CGCCAATATG
GTGGCGGAGG TGTGCTCGAC CTACGTCCTG CGGGTCGACA ATACGCTCGA ACTCTACGCC
ACCGAAGGCC TCAACCGCGA GGCGGTGCAC CAGACCGTGC TGACCGCGCA TGAAGGCCTG
GTCGGCCTCG TCGCCTCCGA GGCGACGCCG CTGAATCTCT CCGACGCGCA GAGCCATCCG
GCGTTCTCGT TCCGCCCGGA GACCGGCGAA GAAATCTATC ACTCCTTCCT CGGCGTGCCG
ATTCTGCGCG CCGGCAACAC GCTCGGCGTG CTGGTGTTGC AGAACCGCGC CAAGCGCACC
TATGTCGAGG AAGAGGTCGA GGCGCTGCAG ACCACCGCGA TGGTGCTCGC CGAAATGATC
GCCTCGGGCG AATTGTCGGC GCTGGCGCAG CCCGGCGCCG AGCCCGCGGC ACGGCACTCG
ATCCACAAGA CCGGCGCGAT CCTGTCCGAC GGCATCGCGC TCGGCCATGT CGTGCTGCAC
GAGCCGCGCG TCGTCATCAC CAACTACATC GCCGAGGATC TGCCGAAGGA AATCAGGCGG
CTCGACACCG CTTTGGCCAA TCTGCGCGCC GATCTCGACC GTCTGCTGGA GCGCGGCGAC
GTCGCCGACG GCGGCGAGCA TCGCGACGTG CTCGAAGCCT ACCGGATGTT CGCCAACGAC
CACGGCTGGT CGCACAAGCT GCACGAGGCG GTGGCCACCG GCCTCACCGC GGAAGCCGCC
GTCGAGCGCG TGCAGTCCGA CACACGGGCC CGGATGCTGC GCTCGACCGA TCCGTATTTG
CGCGACCGGC TGCACGATCT CGAGGACCTC GGCCACCGGC TGATGCGCCA GCTGGTCGGC
CAGAATCACG CACCGTCCCG CGAGCAATTG CCCGACAACG CCATCCTGAT CGCGCGCTCG
ATGGGCCCGG CGGCGCTGCT CGACTACGAC CGCAAGAGGC TGCGCGGCCT GGTGCTCGAA
GAGGGCACCG CGAATTCGCA CGTCTCGATC GTGGCGCGCG CGCTCGGCAT TGCGGCGATC
GGCGAAGTGC CGAACGCGCC GGGCATCGCC GATCCGGGCG ACGCGATCAT CGTCGATGCC
ACCTCCGGCT CGATCTATGT CCGCCCCTCC GCGGAGGTCG AGGCCGCCTA TGCCGAGCGG
GTGCGCTTTC GCGCGCGGCG CCAGGCGCAG TATTCCGCGC TGCGCGATCT CGCCTGCGTC
ACCACCGACG GCCAGCCGAT CGACCTGATG ATCAATGCCG GTCTGGCGAT CGACCTGCCG
CATATCGACG ACACCGGCTC GTCCGGCGTC GGCCTGTTCC GCACCGAGCT GCAGTTCATG
ATCGGCCAGA GCCTGCCGCG CTCCAGCGAT CAGCTCGCGC TGTACCGCGC CGTGCTCGAT
GCCGCGGGAT CCAAGCCGGT GACCTTCCGC ACGCTCGATA TCGGCGGCGA CAAGGCGCTG
CCCTATATGG AAACCGTGGT CGAGGAGAAT CCTGCGCTCG GCTGGCGGGC GATCCGGCTC
GGGCTGGACC GGCCGGGCCT GCTGCGCAGC CAGATCCGGG CGCTGTTGCG CGCCGGCGGC
GGGCGCAATC TGCGCATCAT GTTTCCGATG ATCTCGGAAG TCGCCGAATT CGACGCCGCC
AAGGCGATCG TCGAGCGCGA ACTGACCTAT CTGCGCCAGC ACGGCCACAC GCTGCCGGAG
CGGGTCGACG TCGGCACCAT GGTCGAAGTG CCGGCGCTGC TGTATCAGCT CGACGAACTG
TTCAAGAAGG TCGACTTCAT TTCGGTCGGC TCCAACGATC TGTTCCAGTT TTTGTATGCG
GTCGACCGCG GCAACGCCAA GGTGTCGGAC CGCTTCGACA CACTGTCGGC CCCCATCCTG
CGGGCGCTGC GCGACATCGT GCGCAAGGCC AAGGCCGCCA AGCGCTCGGT GTCGCTGTGC
GGCGAGATGG CGTCGCAGCC GCTGGGGGCG CTGGCGCTGA TCGCGATCGG CTATCGGGCG
CTGTCGGTGT CGGCGGTGTC GCACGGCCCG GTCAAGGCGA TGATCCTCGA ACTCGACGCT
GCCAAGGCCG AGGCGGCGAT CTCGCCGTTG CTCGATGCGC CCGCCGGCAG CGTCTCGATC
CGGCACAAGC TCGCGGAATT CGCCGAGGCT CACGGGCTGT CCTTGTAG
 
Protein sequence
MRSTSGGPRV LLRRLRETMA EQVSAQERLD KIVVLIAANM VAEVCSTYVL RVDNTLELYA 
TEGLNREAVH QTVLTAHEGL VGLVASEATP LNLSDAQSHP AFSFRPETGE EIYHSFLGVP
ILRAGNTLGV LVLQNRAKRT YVEEEVEALQ TTAMVLAEMI ASGELSALAQ PGAEPAARHS
IHKTGAILSD GIALGHVVLH EPRVVITNYI AEDLPKEIRR LDTALANLRA DLDRLLERGD
VADGGEHRDV LEAYRMFAND HGWSHKLHEA VATGLTAEAA VERVQSDTRA RMLRSTDPYL
RDRLHDLEDL GHRLMRQLVG QNHAPSREQL PDNAILIARS MGPAALLDYD RKRLRGLVLE
EGTANSHVSI VARALGIAAI GEVPNAPGIA DPGDAIIVDA TSGSIYVRPS AEVEAAYAER
VRFRARRQAQ YSALRDLACV TTDGQPIDLM INAGLAIDLP HIDDTGSSGV GLFRTELQFM
IGQSLPRSSD QLALYRAVLD AAGSKPVTFR TLDIGGDKAL PYMETVVEEN PALGWRAIRL
GLDRPGLLRS QIRALLRAGG GRNLRIMFPM ISEVAEFDAA KAIVERELTY LRQHGHTLPE
RVDVGTMVEV PALLYQLDEL FKKVDFISVG SNDLFQFLYA VDRGNAKVSD RFDTLSAPIL
RALRDIVRKA KAAKRSVSLC GEMASQPLGA LALIAIGYRA LSVSAVSHGP VKAMILELDA
AKAEAAISPL LDAPAGSVSI RHKLAEFAEA HGLSL