Gene RPB_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0071 
Symbol 
ID3907811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp72806 
End bp73540 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID637881952 
Producthypothetical protein 
Protein accessionYP_483694 
Protein GI86747198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.878621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.643653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACG GGCAGAACAA CAAGCGGCTG CGTAACCGGA ACAGCGGTAG CAACACCAAC 
AATAACAACA ACAATCGGCG TGGCCAGAAC CCGATGACCA GGGTGTTCGA GTCGAACGGG
CCCGATATCA AGATCCGCGG CACCGCCTCT CACGTCGCAG AGAAATACGT CCAGCTCGCG
CGCGATGCGC GCTCCTCCGG CGATCCGGTC GCTGCGGAAA ATTATTATCA GCACGCCGAG
CATTACTTCC GCCTGATCGC CGCGGCGCAG GAGCAGTTCC GGCAGAACCA GCCGCAGCAG
GCGCCCCGCA TCGACAACGA CATGTCGGAG AACGACGACG ACGGCGAGAG CGATTATTCG
AATTTCGGCG CCGAGCCCGG CCTCGTCCCG GTGCAGCAGC AGCCGCAATC CTTCCAGCCG
CGCGAACCCC GCGAACAGCC GCAGTTTCAG CCGCGTGAGC CGCGCGAACA GCCGCAGCCG
CGCGAGCATC GGCCGCAGCC GCAGTTCACG CCGCGGGTCG AGCAGCCGCA GCCGAGCGTC
GATGCCGGGG TCGATCGTCT GCCCTCGTTC ATCACCGGTC CGCAGCCGCA GATCAGCCCC
GCAGCCTTCG AGGGCGCGAC CGGCGGCGGC GGCGAGCGCT TCCCGCCGCG TCGCCGGCGT
CGGCCGCACG CGCCACGCGG TGATGCCGCG GCCGCGCCTG TGCCGGCCGA GGACGCTTCG
CCCGGCAACG AGTAA
 
Protein sequence
MRNGQNNKRL RNRNSGSNTN NNNNNRRGQN PMTRVFESNG PDIKIRGTAS HVAEKYVQLA 
RDARSSGDPV AAENYYQHAE HYFRLIAAAQ EQFRQNQPQQ APRIDNDMSE NDDDGESDYS
NFGAEPGLVP VQQQPQSFQP REPREQPQFQ PREPREQPQP REHRPQPQFT PRVEQPQPSV
DAGVDRLPSF ITGPQPQISP AAFEGATGGG GERFPPRRRR RPHAPRGDAA AAPVPAEDAS
PGNE