| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0070 |
|---|
| Symbol | |
|---|
| ID | 3907810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 71962 |
|---|
| End bp | 72726 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637881951 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_483693 |
|---|
| Protein GI | 86747197 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.90869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGG ACGTGGTCAA TCTGCGCGAG TTCTACTCCA ACCGGCTCGG CGTGGTCGCG
CGGCGGCTGA TCAATCGCGG TATCCAGACG CGCTGGCCGG ATGCGCGGGG CCAGCGCGTC
CTCGGGCTCG GCTATCCGAC GCCGTATCTC GGGCTGTTTC GTCACAATTG CGAACGCTGC
ATCGCTTTCA TGCCGGCGGC CCAGGGTGTG CTGAAATGGC CGACCGCCCG CGCCACGCTG
TCGACGCTGG TGGAGGAGCG CGCGCTGCCG CTGCCCGACG CCGCGGTCGA CCGCATCCTG
CTGGTGCATT CGCTGGAAAT GTCCGACGAT CCCGACGCGC TGTTGCGCGA GGTGTGGCGG
GTGCTGGCGC CCTCGGGCCG GTTGCTGGCG GTGGTGCCGA ACCGCCGCGG CGTCTGGGCG
CGGATCGACA ACACGCCGTT CGGCCACGGC CGGCCGTATT CACGCTCGCA GATCTCCGAT
CTGCTGCGGC GGACCTGGTT CACGCCGATC GGCTGGAGCG AGGCCCTGTT CGTGCCGCCG
CTCGAACAGG CCTGGCTGCT GCGCTGGGCG CCGGCGTGGG AACGAATCGG CGCCGCCATC
TCGCTGCCGC TGGCCGGCGT GCATGTGGTC GAAGCGACCA AGCAGGTGGT GCGGCCGATC
CAGGCCAAGC GCGAACGCAC CCGGCTGATT CCCTCGCTGG AGCCGTCGCT GGTGCCGTCA
CCGATGCAGG CGGACGATAC CGACGCTCCG CTGCTGCCGC GCTGA
|
|---|
| Protein sequence | MTMDVVNLRE FYSNRLGVVA RRLINRGIQT RWPDARGQRV LGLGYPTPYL GLFRHNCERC
IAFMPAAQGV LKWPTARATL STLVEERALP LPDAAVDRIL LVHSLEMSDD PDALLREVWR
VLAPSGRLLA VVPNRRGVWA RIDNTPFGHG RPYSRSQISD LLRRTWFTPI GWSEALFVPP
LEQAWLLRWA PAWERIGAAI SLPLAGVHVV EATKQVVRPI QAKRERTRLI PSLEPSLVPS
PMQADDTDAP LLPR
|
|---|
| |