| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0063 |
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| Symbol | |
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| ID | 3907803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 66038 |
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| End bp | 67363 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637881944 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_483686 |
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| Protein GI | 86747190 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGA TTGGTGAATT TGGCCGTCCG CCGGAGCTGC CGGCCGAAGT CAGTCCGGCG
ATGACCACGC CGATGTACTG GTTCTACGAA CTCGCTCACG CCTCGCTCAA TCCGGCGCGC
GCGATGTCGG ACGCAGCAAA GCTGATGTTC AAGAATCCGC TGAACCCGTG GAGTCACACC
GATCTCGGCA AGTCGATCGC GGCGGCCTGC GAAGTGTTCG AGCGTACCAC GCGCCGTTAC
GGCAAGCCGG AATGGGGCCT CGACACCACC GAGGTCAACG GCATGCGGGT GCCGATCGAA
ATTCACAATG TGTGGGAAAA GCCGTTCTGC CGGCTGTTGT ATTTCGAACG CAAGCTGGAA
CACCCGCTGC GCCATCCGCA GCCGCGGGTG CTGATCGTGG CGCCGATGTC GGGTCACTAC
GCGACGCTGC TGCGCGGCAC CGTCGAGGCC TTCCTGCCGA CCCACGAAGT GTACATCACC
GACTGGACCG ATGCCCGGAT GGTGCCGGTC GCCGCCGGCC GCTTCGACCT CGACGACTAT
GTCGACTATG TCATCGAGAT GCTGCAGACG CTGGGCGGCA ACGTCCACGT CGTCGCGGTG
TGCCAGCCCT CGGTGCCGGT GCTGGCCGCG GTCTCGGTGA TGGAAGCCAA CGACGATCCG
TTCGTGCCGC TGTCGATGAC GCTGATGGGC GGCCCGATCG ACACCCGCCG CAATCCGACC
GCGGTCAACA ATCTCGCCGC CGAGAAGGGC ATCGACTGGT TCCGCAGCCA CGTCATCACC
AAGGTGCCGT TCCCGCATCC GGGCGTGATG CGCGACGTCT ATCCGGGATT CCTGCAGCTC
AATGGCTTCA TCAGCATGAA TCTCGACCGC CACATGGACG CGCACAAGAA CCTGTTCAAC
CATCTGGTTC AGGGCGACGG CGACCTCGCC GACAAGCATC GCGAGTTCTA CGACGAATAT
CTGGCGGTGA TGGACCTGAC CGCGGAGTTC TATCTGCAGA CCGTCGATGT GGTGTTCGTC
AAGCACGCGC TGCCGAAGGG CGAGATGATG CATCGGGGCA AGCTGGTCGA GCCGTGGAAG
ATCAAGCGCG TGGCGCTGAT GACGGTCGAA GGCGAGAAGG ACGACATCTC CGGCCTCGGA
CAGACCGAAG CGACGCACAC GCTGTGCAGC TCGATTCCGG ACGAGCGCCG CGTGCACTAC
GTGCAGAAGG GCGTCGGCCA TTACGGCGTG TTCAACGGTT CGCGGTTCCG ATCCGAAATC
GTGCCGCGCA TTTCCGATTT CATGCTGTCG GCCGCGAACG GCGCACGCGC TAACGCGGCG
GAGTAA
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| Protein sequence | MPVIGEFGRP PELPAEVSPA MTTPMYWFYE LAHASLNPAR AMSDAAKLMF KNPLNPWSHT
DLGKSIAAAC EVFERTTRRY GKPEWGLDTT EVNGMRVPIE IHNVWEKPFC RLLYFERKLE
HPLRHPQPRV LIVAPMSGHY ATLLRGTVEA FLPTHEVYIT DWTDARMVPV AAGRFDLDDY
VDYVIEMLQT LGGNVHVVAV CQPSVPVLAA VSVMEANDDP FVPLSMTLMG GPIDTRRNPT
AVNNLAAEKG IDWFRSHVIT KVPFPHPGVM RDVYPGFLQL NGFISMNLDR HMDAHKNLFN
HLVQGDGDLA DKHREFYDEY LAVMDLTAEF YLQTVDVVFV KHALPKGEMM HRGKLVEPWK
IKRVALMTVE GEKDDISGLG QTEATHTLCS SIPDERRVHY VQKGVGHYGV FNGSRFRSEI
VPRISDFMLS AANGARANAA E
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