Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0047 |
Symbol | pheT |
ID | 3908133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 46160 |
End bp | 48568 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881928 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_483670 |
Protein GI | 86747174 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA CCCTCTCCTG GCTGAAAGAC CATCTCGACA CCGACGAGCA GCTCGACGCG CTCGCCGACA AGCTCACCAT GATCGGGCTC GAGGTCGAGG GCATCGAAGA CAAGGCCAAG GCGCTGGCGC CGTTCACCAT CGCCTTGGTG CTGACCGCCG AGAAGCATCC CAACGCCGAC AAGCTGCAGG TCTGCAGCGT CGACACCGGC GCGGGCGCGC CCGTGCAGGT GGTGTGCGGC GCCCCGAATG CGCGCGCCGG CCTCGTCACC GTGTTCGCGC CGCCCGGCAC CTTCATTCCG GCCAAGGCCA TCACGCTGGG CATCGGCAAC ATCCGCGGCG TCGAGAGCCG CGGCATGCTG TGCTCGGCCG CCGAGCTTGA GCTCTCCGAG GACCACGACG GCATCATCGA GCTGCCGGCG GATGCGCCGA TCGGCCAGGG CTTTGCAGAA TGGGCCGGGC TCGGCGATCC GGTGCTCGAC ATCAATCTGA CGCCGAACCG GCAGGACTGC GCCGGCATTT CCGGCATCGC CCGCGATCTC GCCGCCGCCG GCATGGGCAA GTTCAAGAAC CCGTCGATCA AGCCGATCAA GGGCGACTTC CCCTGCCCGG TGAAGGTCAG CGTCGAAGAC GACAAGCTCT GCCCCGGCTT CGCGCTGCGG CTGGTGCGCG GCGTCAAGAA CGGCCCGTCG CCGGACTGGC TGCAGCAGCG GCTCACCGCG ATCGGGCTGC GCCCGATCAA CGCGCTGGTC GACATCACCA ACTTCCTGAC CTTCGACCGC TCGCGCCCGC TGCACGTGTT CGACGCCGCC AAGGTCTCGG GCGATCTCGT CGTGCGCCGC GCCAAGGACG GCGAGACGCT GCTGGCGCTC GACGGCCGCA GCTACACGCT CGACCCCAAC GTCTGCGTCA TCGCCGACGC CCACGGCGTC GAATCGCTCG CCGGCATCAT GGGCGGCGAA GCCTCCGGCT GCTCCGACGA CACCACCGAC GTGCTGATCG AATCCGCGCT GTGGAACGAG ATCAATATCG CGCAGTCCGG CCGCCGGCTC GGCATCAACA CCGACGCTCG CTATCGCTTC GAACGCGGCG TCGATCCGGC CTTCATGGTG CCGGGGCTCG ACCTCGCGAC GCATCTGGTG ATGCAATTCT GCGGCGGCAC GCCGTCGGAG GCCGTCGTGG TCGGCAAGGC GTTCGGCGAC GACCGCATCA TCGATTTCCC GCTCAGCGAA GTGAAGCGGC TCGCCGGCAT CGAAGTGCCG TTCGTGGAAG TGCGCCGGAT TCTCACGCAT CTCGGCTTCA TGGTGGCGGG CTCGGGCGCG GTGGTGAAGG TCGCGGTGCC GTCGTGGCGC AGCGACGTCC ACGGCAAGGC CGACATCGTC GAGGAAATCG TCCGCATCGT CGGCGTCGAC AAGGTGCCGA TGACGCCGTT CGAGCGCGGC GACGCACCGC GCAAGCCGGT GCTGACCCAG ATCCAGACCC GCACCCGTCG CGCCAAGCGC GCGCTGGCCG CGCGCGGCCT GACCGAGGCG GTGACTTGGT CGTTCATTTC CAAACCAAGC GCCGAAGCCT TCGGCGGCGG CCAGCCCGAA TTGGCGCTGG CCAATCCGAT CGCCGCGGAT CTCTCCGACA TGCGGCCGAG CCTGCTGCCT GGGCTGATCG CCGCCGCGCA GGCCAACGCC GATCGCGGCA TCCCGGATCT GGCGCTGTTC GAGGTCGGGC AGATCTTCAA GGGCGACCGG CCGCAGGATC AATTCATCGC GGCGAGCGGC GTGCGCCGCG GCGTCGCCTC CGCGCAGGGT CTCGGCCGGC ACTGGTCGGG CTCGGCGCAA GCGAGCGCGC TCGACGCCAA GGCCGATGCC TTCGCTGTGC TGGCGGCGGC CGGCGCGCCG ATGGCGGGGC TGCAGATCGC GACGAATAAA TTGCCCGCCT GGCTGCATCC CGGCCGCTCC GGCGCGATCC AGATCGGGCC GCAGAATGTG CTGGGCTATT TCGGCGAGCT GCATCCGCGC GTGCTCGAGC AGTTGCACGC CGACGGACCG CTGGTGGCGT TCGAGGTGCT CCTCGACAAG ATCCCCGACG CCAAGCAGCG CCCGACCCGC GCCAAGCCGG CGCTGGAATT GTCGGCGTTC CAGCCGGTGT CGCGCGACTT CGCCTTCATC GTCGACCGCA AGGTCGCGGC TGCCGACCTG GTCCGTGCCG CGCAGGGCAT CGACAAGAAG CTCATCACCT CGGTCGGCGT GTTCGACGTG TACGAGGGCA AGGGCATCGA TACCGACAAG AAGTCGATCG CGATCGCGGT GACGCTGCAG CCGCGCGACA AGACCATGAC CGACCAGGAA ATCGACGCAG TCGGCGCGAA GATCGTCGCC GAGGTGACGA AGAAGACCGG CGGCGTGCTG CGCGGCTGA
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Protein sequence | MKLTLSWLKD HLDTDEQLDA LADKLTMIGL EVEGIEDKAK ALAPFTIALV LTAEKHPNAD KLQVCSVDTG AGAPVQVVCG APNARAGLVT VFAPPGTFIP AKAITLGIGN IRGVESRGML CSAAELELSE DHDGIIELPA DAPIGQGFAE WAGLGDPVLD INLTPNRQDC AGISGIARDL AAAGMGKFKN PSIKPIKGDF PCPVKVSVED DKLCPGFALR LVRGVKNGPS PDWLQQRLTA IGLRPINALV DITNFLTFDR SRPLHVFDAA KVSGDLVVRR AKDGETLLAL DGRSYTLDPN VCVIADAHGV ESLAGIMGGE ASGCSDDTTD VLIESALWNE INIAQSGRRL GINTDARYRF ERGVDPAFMV PGLDLATHLV MQFCGGTPSE AVVVGKAFGD DRIIDFPLSE VKRLAGIEVP FVEVRRILTH LGFMVAGSGA VVKVAVPSWR SDVHGKADIV EEIVRIVGVD KVPMTPFERG DAPRKPVLTQ IQTRTRRAKR ALAARGLTEA VTWSFISKPS AEAFGGGQPE LALANPIAAD LSDMRPSLLP GLIAAAQANA DRGIPDLALF EVGQIFKGDR PQDQFIAASG VRRGVASAQG LGRHWSGSAQ ASALDAKADA FAVLAAAGAP MAGLQIATNK LPAWLHPGRS GAIQIGPQNV LGYFGELHPR VLEQLHADGP LVAFEVLLDK IPDAKQRPTR AKPALELSAF QPVSRDFAFI VDRKVAAADL VRAAQGIDKK LITSVGVFDV YEGKGIDTDK KSIAIAVTLQ PRDKTMTDQE IDAVGAKIVA EVTKKTGGVL RG
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