| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0038 |
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| Symbol | |
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| ID | 3909721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 37966 |
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| End bp | 39186 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637881919 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_483661 |
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| Protein GI | 86747165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCC TGATTCAGGC CGCCACGGCG GCTGTTGCTG CGATTGTGCT CACTGCCGCC
CCGGCTGCGG CACAGAAGAA ATACGACACC GGCGCCACCG ATACCGAGAT CAAGATCGGC
CAGACCGTGC CGTTCTCCGG TCCCGCCTCG GCCTATGCGG GCATCGGCAA GACCCAGGCG
GCCTATATGC GGATGATCAA CGATGCCGGC GGCATCAACG GCCGCAAGAT CAACCTGATC
CAGTACGACG ACGCCTATTC GCCGCCGAAA GCGGTCGAGC AGGTGCGCAA GCTGGTCGAA
AGCGACGAGG TGCTGCTGAC CTTCCAGATC ATCGGCACCC CGTCCAACGC CGCGGTGCAG
AAATATCTCA ACCAGAAGAA GGTGCCGCAA CTGCTCGCGG CGACCGGCGC GACACGGTTC
ACCGATCCGA AGAATTTCCC CTGGACGATG GGCTACAACC CGAACTACCA GACCGAGGGT
CGGATCTACG CGCGCTACAT CCTGAAGAAC CACCCCGACG CCAAGATCGG CGTGCTGTTC
CAGAACGACG ATCTCGGCCG CGACTACGTC ACCGGCCTGC GGGCCGGCCT CGGCGACAAG
GCCGACAAGA TGATCGTGGC GGAGACGTCC TATGAACTCA CCGACCCGAC CGTCGACTCG
CAGATCGTCA AGCTGAAATC CGCCGGCGCC ACGCTGCTGT ACGACGCATC GACGCCGCGC
TTCGCCGCGC AGGCGATCAA GAAAGTCGCC GATCTCGGCT GGAATCCGGT GCACATCCTC
GACATCAACG CCAGCCCGGT GTCGGCGACG CTGAAGCCCG CCGGCCTCGA CATCTCCAAG
GGCATCATCA GCGTCAATTA CGGCAAGGAC CCCGCCGACC CGCAATGGGC CGACGACCCG
GGCGTGAAGA AGTACTTCGC CTTCATGGAC AAGTACTATC CCGAGGGCGA CAAGATGAAC
ACCGTCAACA GCTACGGCTA TTCCACCGCG GAGCTGCTGA TCACCATCCT GAAGCAGTGC
GGCGACAATC TCACCCGCGA CAACATCATG AAGCAGGCCG CCAATCTGAA GAACGTCACG
CTCGACCTGT CGCTGCCGGG CATGTCGATC AATACCTCGC CGACCGACTT CCGCGTCAAC
AAGCAGTTGC GGATGATGAA GTTCAACGGC GAGCGCTGGG AGCTGTTCGG CCCGATCATT
GAGGACGACG CCGCGATGTG A
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| Protein sequence | MKSLIQAATA AVAAIVLTAA PAAAQKKYDT GATDTEIKIG QTVPFSGPAS AYAGIGKTQA
AYMRMINDAG GINGRKINLI QYDDAYSPPK AVEQVRKLVE SDEVLLTFQI IGTPSNAAVQ
KYLNQKKVPQ LLAATGATRF TDPKNFPWTM GYNPNYQTEG RIYARYILKN HPDAKIGVLF
QNDDLGRDYV TGLRAGLGDK ADKMIVAETS YELTDPTVDS QIVKLKSAGA TLLYDASTPR
FAAQAIKKVA DLGWNPVHIL DINASPVSAT LKPAGLDISK GIISVNYGKD PADPQWADDP
GVKKYFAFMD KYYPEGDKMN TVNSYGYSTA ELLITILKQC GDNLTRDNIM KQAANLKNVT
LDLSLPGMSI NTSPTDFRVN KQLRMMKFNG ERWELFGPII EDDAAM
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