Gene RPB_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0033 
Symbol 
ID3909716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp33043 
End bp33582 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID637881914 
ProductMarR family transcriptional regulator 
Protein accessionYP_483656 
Protein GI86747160 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.674408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTTT CCGCGCCGGC ACGACATATT GACAGTATGC TGCCATTTTG GCAGTATACT 
GTCATGACTG ATGAAGCTCA CGCCCCCTTT GACCACCCCG CCAATGCGCT GGTGCTGGAA
GTCTTCCGGC TCAACGGCGC GTTGATCCGG TTCGGCGACG CACTGGTGAA GCCGCTCGGC
CTCAGCAGCG CGCGCTGGCA GGTGCTGGGC TCGATCGCGC ATGGCCGCGG CACGTTTTCG
GTGGCGCGGC TCGCCGACAA TATGGGTCTC GCCCGCCAGT CGGTGCAGCG CATCGTCGAC
GAATTGGCCG AGGCCGGCCT GGTCGGCTTC GAAGCCAACC CGGCGCACAA GCGCGCCAAG
CTGGTGGTGA TGACGCCGCG CGGCGAGCGC GCCTTCGCCC GCGCCACCGA CTTGTGGCGG
CCGGTCGCCG ACGCGATGGC GGGCGGGCTC GCCGCCCGCG ACCTTCGCAA GACCATCGAC
AACCTCGCGG CCCTGCGGGG CCGGCTGGAA GATCAATCCG AAAACGGGAG TTCAGCATGA
 
Protein sequence
MRFSAPARHI DSMLPFWQYT VMTDEAHAPF DHPANALVLE VFRLNGALIR FGDALVKPLG 
LSSARWQVLG SIAHGRGTFS VARLADNMGL ARQSVQRIVD ELAEAGLVGF EANPAHKRAK
LVVMTPRGER AFARATDLWR PVADAMAGGL AARDLRKTID NLAALRGRLE DQSENGSSA