Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0019 |
Symbol | |
ID | 3909702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 19785 |
End bp | 20522 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881900 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_483642 |
Protein GI | 86747146 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCCAC GCAACGCAAC CGTCGCGGTG ATCGGCGCCG GCGACTACAT CGGCGCCGAG ATCGCCAGGA AATTCGCCGC CGAAGGCTTC ACGGTGTTCG CCGGCCGGCG CGACGGCGCC AAGTTGGAGC CGCTGGTGCG GGAGATCGAG GCGGCCGGCG GCCGCATCGT CGCGCGCACG CTGGATGCCC GCAAGGAGGA CGAGGTCGCG GCGTTTCTCG ACGCCGCCGA CGCGCATGCG CCGCTCGACG TGACGATCTT CAACGTCGGC GCCAACGTCA ATTTCCCGAT TCTGGAGACC ACCGACCGGG TGTTCCGCAA GGTCTGGGAA ATGGCGTGCT GGGCGGGCTT TCTCGCCGGG CGGGAATCGG CGCGGCTGAT GCTGCCGCGC GGACGGGGCA ACATTTTCTT CACCGGCGCG ACCGCGTCGC TCCGCGGCGG CTCGGGTTTC GCGGCCTTCG CCAGCGCCAA ATTCGGGCTG CGCGCGGTGG CGCAGTCGAT GGCGCGCGAA TTGATGCCGC AGAACATCCA CGTCGCGCAT CTGATCATCG ATTCGGGGGT CGACACCGCC TGGGTCCGCG AGCGCCGCGA GCAGCTCTGG GGCAAGCAGG CGCTCGACAA TCCCGACCTC CTGATGCCGC CGGCCTCGGT CGCCGGGGCC TATTGGCAGC TCTATCAGCA GCCGAAAAGC GCCTGGACCT TCGAGATGGA AATCCGTCCC TTCGGGGAAA AGTGGTAG
|
Protein sequence | MTPRNATVAV IGAGDYIGAE IARKFAAEGF TVFAGRRDGA KLEPLVREIE AAGGRIVART LDARKEDEVA AFLDAADAHA PLDVTIFNVG ANVNFPILET TDRVFRKVWE MACWAGFLAG RESARLMLPR GRGNIFFTGA TASLRGGSGF AAFASAKFGL RAVAQSMARE LMPQNIHVAH LIIDSGVDTA WVRERREQLW GKQALDNPDL LMPPASVAGA YWQLYQQPKS AWTFEMEIRP FGEKW
|
| |