Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0005 |
Symbol | gyrB |
ID | 3910210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5462 |
End bp | 7903 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637881886 |
Product | DNA gyrase subunit B |
Protein accession | YP_483628 |
Protein GI | 86747132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.974369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC CCGCCCGGCA GCCGATCGCC GAAACCCCGT CGCCCGTTCC GGCCGAATAC GGCGCGGAAT CGATCCGGGT GCTGAAGGGC CTCGACGCTG TCCGCAAGCG GCCGGGCATG TATATCGGCG ACACCGACGA CGGCTCCGGC CTGCACCACA TGGTGTACGA AGTCGTCGAC AACGCCATCG ACGAAGCGCT CGCCGGCCAC GCCACCGCGG TCGAAGTCGT GCTCAACGCC GACGGCTCGG TGACGGTGCG CGACGACGGC CGCGGCATTC CGGTCGACAT CCACAAGGGC GAAGGCATTT CGGCGGCCGA AGTCATCATG ACCCAGCTCC ATGCCGGCGG AAAATTCGAC CAGAACTCCT ACAAGGTGTC CGGCGGACTG CACGGCGTCG GCGTCTCGGT GGTCAATGCG CTGTCGAGCA AGCTGGTCCT GCGCGTGTGG CGTAACGGCA AAGAGCACAT CATCGAATTC GCCCATGGCG ACGCGGTGGC GCCGCTGAGC GTTGTCGGCG ACGCCAATGG CCGGCGCGGC ACCGAGGTGA CATTTTTCGC GTCGCCGGAA ACCTTCACCC ACATCGAATA CGACTTCGCG ACGCTGGAGC ATCGCTTACG CGAACTCGCC TTCCTGAATT CCGGCGTGAA CATCGTATTG TCCGACATGC GCCACCCGGT CGAGAAGCGC GAGGAGATGC GCTACGAGGG CGGCGTCACC GAATTCGTCA AATATCTCGA CCGCAACAAG AAGCCGATGG TGCCGGCGCC GATCGTGCTG GCGGCGGATC TCAACGGCAT CGGCGTCGAA GCCGCATTGT GGTGGAACGA GACCTACCAC GAGAACGTGC TGTGCTTCAC CAACAACATC CCGCAGCGCG ACGGTGGTAC GCATCTGGCC GGCTTCCGCG CCGCGCTGAC GCGGCAGGTC AACGGCTATG CGGACAGCAA CGCCAAGAAG GAAAAGATCG CGCTGACCGG CGACGATTGC CGCGAAGGCC TCACCGCGGT GCTGTCGGTG AAGGTGCCGG ATCCGAAGTT CTCGTCGCAG ACCAAGGACA AGCTGGTGTC CTCGGAAGTC CGGCCGGTGG TCGAGAACGT GCTGAACGAA GCGCTCGCAG CCTGGTTCGA GGAACATCCC GCCGAAGCCA AGGTCATCGT CGGCAAGGTG ATCGAAGCCG CCGCCGCCCG CGAAGCCGCG CGAAAAGCGC GCGAGCTGAC GCGGCGCAAG GGCGCGCTGG ATATCGCCTC GCTGCCCGGT AAGCTCGCCG ACTGCCAGGA GCGCGATCCG TCGAAATCCG AACTGTTCAT CGTCGAGGGT GACTCCGCCG GCGGCTCCGC CAAGCAGGGC CGCAACCGCG AATTCCAGGC CGTGCTGCCG CTGCGCGGCA AGATCCTCAA TGTCGAGCGC GCGCGCTTCG ACAAGATGCT GGGCTCCGAG CAGATCGGCA CGCTGATCAC CGCGCTCGGC ACCGGCATCG GCCGCGACGA TTTCGACATC GCCAAGCTGC GCTACCACAA GATCATCCTG ATGACCGACG CCGACGTCGA CGGCGCGCAC ATCCGCACGC TGCTCTTGAC GTTCTTCTTC CGGCAGATGC CGGCTCTGAT CGAGGGCGGC TTCCTCTACA TCGCGCAGCC GCCGCTGTAC AAAGTGACGC GCGGCAAGTC GGAGCAGTAT CTCAAGGACG AGCGCGCGCT CGAGGAATAT CTGATCGCGA CCGGACTCGA CGATTGCGCG TTCAAGATCG CCTCCGGCGA AGTCCGCGGC GGGCGGGATC TGCTGGCGCT GGTCGAGGAC GCCCGCGTGA TCCGCCAGAC GCTGCACAAT CTGCACGGCC GCTACAATCG CTCGGTGGTC GAGCAGGCGG CGATCGCCGG CGTGCTCAGC CCGCGGATCA CCAGCGACGT GGCGACCGCC AACGAAGCCG CCGCCTATAT CGCGCGCCGG CTCGACGCGC TGGCCGACGA GGTCGAGCGC GGCTGGATCG GCCGCTTCGT CGAAGGCGAA GGCTTCCACT TCGAGCGCAC CGTGCGCGGC GTCAAGGACG TGGCGATGAT CGACGACGCG CTGCTCGGCT CCGCCGACGC CCGCAAGCTC GATGAATACG CCGCCGTGCT GCAGGAGGTC TATCCGCGCC CCGGCGTGCT GCGCCGCAAG GATGCGGAAA CCGCGATCCA CGGCCCGGTC AGCCTGTTCG AGGCGGTGAC CGACGCTGGC CGCAAGGGCG TGGCGCTGCA GCGCTACAAA GGCCTCGGCG AGATGAACCC GAGCCAGCTC TGGGAGACCA CGCTCGACAC CAACGCCCGC TCGCTGCTGC AGGTGAAGGT CCGCGAAGTC GACGAAGCCG ACGACATCTT CACCAAGCTG ATGGGCGACG TCGTCGAACC CCGCCGCGAA TTCATCCAGG AGAATTCGCT GAGCGCGACG GTGGACGTGT AA
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Protein sequence | MTEPARQPIA ETPSPVPAEY GAESIRVLKG LDAVRKRPGM YIGDTDDGSG LHHMVYEVVD NAIDEALAGH ATAVEVVLNA DGSVTVRDDG RGIPVDIHKG EGISAAEVIM TQLHAGGKFD QNSYKVSGGL HGVGVSVVNA LSSKLVLRVW RNGKEHIIEF AHGDAVAPLS VVGDANGRRG TEVTFFASPE TFTHIEYDFA TLEHRLRELA FLNSGVNIVL SDMRHPVEKR EEMRYEGGVT EFVKYLDRNK KPMVPAPIVL AADLNGIGVE AALWWNETYH ENVLCFTNNI PQRDGGTHLA GFRAALTRQV NGYADSNAKK EKIALTGDDC REGLTAVLSV KVPDPKFSSQ TKDKLVSSEV RPVVENVLNE ALAAWFEEHP AEAKVIVGKV IEAAAAREAA RKARELTRRK GALDIASLPG KLADCQERDP SKSELFIVEG DSAGGSAKQG RNREFQAVLP LRGKILNVER ARFDKMLGSE QIGTLITALG TGIGRDDFDI AKLRYHKIIL MTDADVDGAH IRTLLLTFFF RQMPALIEGG FLYIAQPPLY KVTRGKSEQY LKDERALEEY LIATGLDDCA FKIASGEVRG GRDLLALVED ARVIRQTLHN LHGRYNRSVV EQAAIAGVLS PRITSDVATA NEAAAYIARR LDALADEVER GWIGRFVEGE GFHFERTVRG VKDVAMIDDA LLGSADARKL DEYAAVLQEV YPRPGVLRRK DAETAIHGPV SLFEAVTDAG RKGVALQRYK GLGEMNPSQL WETTLDTNAR SLLQVKVREV DEADDIFTKL MGDVVEPRRE FIQENSLSAT VDV
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