Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5122 |
Symbol | |
ID | 3370680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 6078989 |
End bp | 6079849 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637655497 |
Product | F0F1 ATP synthase subunit gamma |
Protein accession | YP_238187 |
Protein GI | 66048346 |
COG category | [C] Energy production and conversion |
COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.419828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG CAAAAGAGAT TCGCAGCAAG ATTGCGAGCA TCAAAAGCAC GCAAAAGATC ACCAGCGCCA TGGAAAAAGT GGCGGTTAGC AAAATGCGCA AGGCTCAAAT GCGCATGGCT GCTAGCCGTC CTTACGCGGA GCGCATTCGT CAGGTGATTG GTCATCTGGC AAACGCCAAC CCGGAGTACC GCCACCCGTT CATGATCGAG CGCCCTGTGA AGCGCGTCGG TTATGTCGTC GTGAGCAGTG ACCGTGGTCT GTGTGGTGGC TTGAATACCA ACCTGTTCAA GACTCTGGTC AAGGACATGG CGGTGAACCG TGAAAACGGT GTAGAGATCG ATCTGTGCGT GGTCGGCAGC AAAGGTGCGG CATTTTTCCG CAACTTCGGC GGTAACGTCG TCGCTGCGAT CAGCCACCTG GGCGAAGAGC CGTCGATCAA CGACTTGATC GGCAGCGTCA AGGTGATGCT GGATGCCTAC CTGGATGGCC GTATTGATCG CCTGTCCGTG GTATCCAACA AGTTCATCAA CACCATGACC CAGCAACCAA CAGTGGAGCA ATTGATTCCG CTGGTGGCAA CCCCGGATCA AGGGCTCAAG CACCACTGGG ACTATCTCTA CGAACCCGAT GCCAAAGAGC TGCTAGACGG CCTTATGGTT CGCTACGTGG AATCGCAGGT GTACCAGGCG GTGGTCGAGA ACAACGCAGC TGAACAAGCA GCGCGGATGA TCGCGATGAA GAACGCCACA GACAACGCCG GTGATTTGAT CAGCGATTTG CAGCTGATCT ACAACAAGGC GCGTCAGGCA GCGATCACCC AAGAGATCTC GGAAATCGTC GGCGGCGCTG CCGCGGTTTA A
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Protein sequence | MAGAKEIRSK IASIKSTQKI TSAMEKVAVS KMRKAQMRMA ASRPYAERIR QVIGHLANAN PEYRHPFMIE RPVKRVGYVV VSSDRGLCGG LNTNLFKTLV KDMAVNRENG VEIDLCVVGS KGAAFFRNFG GNVVAAISHL GEEPSINDLI GSVKVMLDAY LDGRIDRLSV VSNKFINTMT QQPTVEQLIP LVATPDQGLK HHWDYLYEPD AKELLDGLMV RYVESQVYQA VVENNAAEQA ARMIAMKNAT DNAGDLISDL QLIYNKARQA AITQEISEIV GGAAAV
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