Gene Psyr_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5122 
Symbol 
ID3370680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6078989 
End bp6079849 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID637655497 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_238187 
Protein GI66048346 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.419828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG CAAAAGAGAT TCGCAGCAAG ATTGCGAGCA TCAAAAGCAC GCAAAAGATC 
ACCAGCGCCA TGGAAAAAGT GGCGGTTAGC AAAATGCGCA AGGCTCAAAT GCGCATGGCT
GCTAGCCGTC CTTACGCGGA GCGCATTCGT CAGGTGATTG GTCATCTGGC AAACGCCAAC
CCGGAGTACC GCCACCCGTT CATGATCGAG CGCCCTGTGA AGCGCGTCGG TTATGTCGTC
GTGAGCAGTG ACCGTGGTCT GTGTGGTGGC TTGAATACCA ACCTGTTCAA GACTCTGGTC
AAGGACATGG CGGTGAACCG TGAAAACGGT GTAGAGATCG ATCTGTGCGT GGTCGGCAGC
AAAGGTGCGG CATTTTTCCG CAACTTCGGC GGTAACGTCG TCGCTGCGAT CAGCCACCTG
GGCGAAGAGC CGTCGATCAA CGACTTGATC GGCAGCGTCA AGGTGATGCT GGATGCCTAC
CTGGATGGCC GTATTGATCG CCTGTCCGTG GTATCCAACA AGTTCATCAA CACCATGACC
CAGCAACCAA CAGTGGAGCA ATTGATTCCG CTGGTGGCAA CCCCGGATCA AGGGCTCAAG
CACCACTGGG ACTATCTCTA CGAACCCGAT GCCAAAGAGC TGCTAGACGG CCTTATGGTT
CGCTACGTGG AATCGCAGGT GTACCAGGCG GTGGTCGAGA ACAACGCAGC TGAACAAGCA
GCGCGGATGA TCGCGATGAA GAACGCCACA GACAACGCCG GTGATTTGAT CAGCGATTTG
CAGCTGATCT ACAACAAGGC GCGTCAGGCA GCGATCACCC AAGAGATCTC GGAAATCGTC
GGCGGCGCTG CCGCGGTTTA A
 
Protein sequence
MAGAKEIRSK IASIKSTQKI TSAMEKVAVS KMRKAQMRMA ASRPYAERIR QVIGHLANAN 
PEYRHPFMIE RPVKRVGYVV VSSDRGLCGG LNTNLFKTLV KDMAVNRENG VEIDLCVVGS
KGAAFFRNFG GNVVAAISHL GEEPSINDLI GSVKVMLDAY LDGRIDRLSV VSNKFINTMT
QQPTVEQLIP LVATPDQGLK HHWDYLYEPD AKELLDGLMV RYVESQVYQA VVENNAAEQA
ARMIAMKNAT DNAGDLISDL QLIYNKARQA AITQEISEIV GGAAAV