Gene Psyr_5104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5104 
Symbol 
ID3370662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6055558 
End bp6056601 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content63% 
IMG OID637655479 
Producttransport system permease protein 
Protein accessionYP_238169 
Protein GI66048328 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGG CGCAGTGGCT GACCGAACGG CCGCGCCGTT ACCTGGGCCT GTTGATCGCT 
CTGACGCTTT TGCTGCTGAC GTCGTGCCTG GTGTGCATCA CCTTCGGCGC GGCCCCTGTG
CCCTTGAGCC GGGTGATGGC TATCCTGATG TTCAAACTCT CCGGTACTGC CGAACACCCA
CCGCTCTGGA CAACGGGACA GGAAACCATC GTCTGGCTGA TACGTACGCC CCGCGTCTTG
CTGGGCGCGC TGGCAGGCGC AGGGCTGGCG TTGATCGGCA GCGTTCTGCA AGCCGCGACC
CGTAATCCGC TGGCCGATCC GCATTTGCTG GGGGCGACCT CGGGCGCCAC GCTTGGCGCC
GTGATCGTGG TCATGCATGT GGGGGAAGTG TTTGGCATGC TGACATTGCC ACTGGCCGCC
TTTGTCGGCT CGCTGGTCAG CCTGTGCCTG GTGCTGTGGC TGGCCAGTCA CCAAGGCCGG
CTGGACAGCC AGCGCCTGCT GCTCGGCGGT GTGGCCGTGT CCTTCGTGAT GATGGCAATC
GCCAACCTGT CGTTGTTTCT GGGCGACCAC CGCGCCAATT CCTCGGTGCT GTTCTGGATG
CTGGGCGGGC TGGGTCTGGC CCGCTGGGAA TTGCTTGCGG TGCCGTTTAT CACGGTGCTA
TGCGGTTGGA TCCTGCTGCA AGGGCTGGGT CGTTCACTGA ACGCGCTGAT GGGCGGCGAC
CAGACCGCCG TGAGCCTTGG CCTGCAAGTG CGCAATATGC GCCTGCTGGT TTTTCTGATC
GCCTCACTGA TGACCGGCGT ACTGGTCGCC CTGTGCGGCT CCATCGGTTT TGTCGGCCTG
ATGGTGCCGC ACATGGCCAG ACGTCTGGTG GGCTCGGAGC ATCGACGACT GTTGCCTGTC
GCCACCCTTC TGGGCGCATT GTTGATGGTC TGGGTCGACG TCATCTCCCG CACGCTGATC
GCCCCCGAAG ACCTGCCGAT AGGCATTACG ACCGCCTTGT TGGGAGGGCT GTTTTTCATT
TTCATGATGA AGCGCGGTCA GTAA
 
Protein sequence
MTLAQWLTER PRRYLGLLIA LTLLLLTSCL VCITFGAAPV PLSRVMAILM FKLSGTAEHP 
PLWTTGQETI VWLIRTPRVL LGALAGAGLA LIGSVLQAAT RNPLADPHLL GATSGATLGA
VIVVMHVGEV FGMLTLPLAA FVGSLVSLCL VLWLASHQGR LDSQRLLLGG VAVSFVMMAI
ANLSLFLGDH RANSSVLFWM LGGLGLARWE LLAVPFITVL CGWILLQGLG RSLNALMGGD
QTAVSLGLQV RNMRLLVFLI ASLMTGVLVA LCGSIGFVGL MVPHMARRLV GSEHRRLLPV
ATLLGALLMV WVDVISRTLI APEDLPIGIT TALLGGLFFI FMMKRGQ