Gene Psyr_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5005 
Symbol 
ID3370557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5936543 
End bp5938108 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content58% 
IMG OID637655374 
Producthypothetical protein 
Protein accessionYP_238070 
Protein GI66048229 
COG category[S] Function unknown 
COG ID[COG5339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTCT CTCGCGGCTT TCAATCGGCG CTGCCGGTCC CGGTACGACT TTCCCATCAT 
CAGAACGGAT ATCTTCACGT CACTATGAAT AAATCAGCAG GTATAGCGAT TGGCGTCATC
GTCGTAGCGG GCGCACTGGC TACGGCCGGT GCCTGGTACA CCGGCAATCA ACTGGAAGGC
GCGCTGAACG ACTCGATCAG CAAGGCCAAT CAGGAGCTGG CCAAGTCGTT CAAAGGCACG
GACACCAGCG TCAAACTGGA AATGCTCTCG CTCGACAAGC ACTTCTTCAG CAGCACGGCG
CACTACCGCG TCGACATCCA GAACCTGTCC GATAGCACCC AGGGCGGCCA GTTCTTGTTT
GTCGACCATA TCGAGCACGG CCCCATTCCG CTGTCGCATC TGAAAACCCT GAACCTGCTG
CCGGTCATGG CCCTGAGCAA TTTCCAGATG GAAAAAAGCC CAAGCGCCGA GAAATGGTTC
GCCATGAGCA AGGACGTTCC ACCGCTCACG GGTCAGGCCA GCATCGGCTA TGACCGCGCC
ACCAAAGGCA CGCTGCAGAT GGCTCCGCTG GAAATGACCG ACGTCGACGG CACGTTCCGT
TTTTCAGGTC TGGACCTGAA CGCCGAGTCG TCCGCCGACG CGGAGAAATT CAGCCTTGCG
GGCAACATGG ACAATTTGCA ACTCAATGTC GCGTCGCCCG ACGGCCCGGT CAGCATCGAA
ATCAAAGGCA TGACCTTCGA CACGGGTGGT ACCAAAGGCA AGTCCGGTTT CTATCTGGGC
CACACCAACA TGAAAATCCA GAACGCGGGT TTCCAGGTGG TGGGCAAGCC ACAGGTGCAG
ATTCGCGATT TCACCAACAC CAACCTGGCG CAGGAAGATG CCGGTAACCT GGCAGCCCAG
ATCAACTACG ATGCCGGCAT GATTGCCTAC GCGGGCAAGG ACGTCGGTTC TGCGCACATG
GGCTTCAAGA TCGCCAACTT CGATGTGCTG GCGACTCAGG CGCTGTATCA GTTGTATCAG
GATAAAATCC TGCCTCAGCA GCAACAGGCC GCGCAGGAGA AACGTCCGTT CCGCCTGGAG
CTGAGCCCGG CTGATCAGGA GCTGATGAAC ACCCAGATGA AAACGCTGCT GGCGGCCAAA
CCGCACATCG AGCTGGAAAA GCTCTCGCTC AAGACCAGCA ACGGTGAAAG CCACATGCGT
ATCGCCGTGG ACCTGGCCGA TCCAGGCCCG CTCGATCAGC CTTCCGATGC GCTGCTCATG
AAGAGCCTGG GCGAAGTCAA CGCCAGGGTC GTCCTGTCCA AGCCGATGAT TCGCGACCTC
GCGACCCAGC AAGCCATGCG TGAAGGCCAG ACCGACCTCA AGGTCATCGC CGATCAGGCC
AAGGCCGCTG GCGACATGGC CAGCGCCATG GCCGAGATGA TGCAACTGGC CAAGGTCGAC
GGCGACAACA TCGTCTCCGA CCTGCATTAC GCCAACCAGA TGGTCGACTT CAATGGCCAG
AAAATGACCG TGCAGCAGTT CATGAGCAAC GTCATGGGCA AGGTCGGCGT GCTGGGTAAC
CAGTAA
 
Protein sequence
MIVSRGFQSA LPVPVRLSHH QNGYLHVTMN KSAGIAIGVI VVAGALATAG AWYTGNQLEG 
ALNDSISKAN QELAKSFKGT DTSVKLEMLS LDKHFFSSTA HYRVDIQNLS DSTQGGQFLF
VDHIEHGPIP LSHLKTLNLL PVMALSNFQM EKSPSAEKWF AMSKDVPPLT GQASIGYDRA
TKGTLQMAPL EMTDVDGTFR FSGLDLNAES SADAEKFSLA GNMDNLQLNV ASPDGPVSIE
IKGMTFDTGG TKGKSGFYLG HTNMKIQNAG FQVVGKPQVQ IRDFTNTNLA QEDAGNLAAQ
INYDAGMIAY AGKDVGSAHM GFKIANFDVL ATQALYQLYQ DKILPQQQQA AQEKRPFRLE
LSPADQELMN TQMKTLLAAK PHIELEKLSL KTSNGESHMR IAVDLADPGP LDQPSDALLM
KSLGEVNARV VLSKPMIRDL ATQQAMREGQ TDLKVIADQA KAAGDMASAM AEMMQLAKVD
GDNIVSDLHY ANQMVDFNGQ KMTVQQFMSN VMGKVGVLGN Q