Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4961 |
Symbol | |
ID | 3370513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5881461 |
End bp | 5882174 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637655330 |
Product | hypothetical protein |
Protein accession | YP_238026 |
Protein GI | 66048185 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAG CCGTGATGCA AGGTGCCGCT ACGGCCGCAA CCGAAAAACC TACGCTCAAA GACCTGGTGC GTGACTTCAT CACCATGGCG CTGATTGTCC GTCGCGGCCG TCAGGCGATC TCGGTCACCG CCTTCGAATC CAGCGTCGAT ACTTTTTTCG CCAACCTGGA GCGTCAGGCG CGCAGCGCCA ACTACAGCGT CGAACAGGTC AAGGACGCCC AATACGCACT GTGCGCATTC CTCGATGAGA GCGTGCTGCG TTCGGGCGAC AACGACATGC GTCGCCACTT CGAAATGGAG CCGTTGCAGT TCCGTTATTT CGGGGTTCAC CTGGCGGGCG AAGGCTTCTT CGAGAAAATC GAACTGCTGC GCGCCGACGT GAAAAAGAAC CTGGATGTGC TCGAGGTGTA TCACCTGTGC CTGGCCCTGG GTTTCGAAGG CAAATTCGGG CTGGGTCAGA AGGACCAGTT GCGCTACCTG GCCAACACGC TGGGCCAGGA CATCGCACGC TACCGCAAGA CGCCAAAGGC GCTGTCGCCT GACTGGGCAT TGCCTGACCA GGTGTCGCAA ATGCTGCGCC ATGAAGTTCC GGTATGGCTT TACCTGGTGC TCATCGCCCT CGTATGCCTG GGTGTCTATC TGACGCTTGA CTGGTTGCTG GGCAAAGACG TGGCCGCGTT GGCCGAACAA ATCAGCCAAC TGTTCAATGC TTGA
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Protein sequence | MTEAVMQGAA TAATEKPTLK DLVRDFITMA LIVRRGRQAI SVTAFESSVD TFFANLERQA RSANYSVEQV KDAQYALCAF LDESVLRSGD NDMRRHFEME PLQFRYFGVH LAGEGFFEKI ELLRADVKKN LDVLEVYHLC LALGFEGKFG LGQKDQLRYL ANTLGQDIAR YRKTPKALSP DWALPDQVSQ MLRHEVPVWL YLVLIALVCL GVYLTLDWLL GKDVAALAEQ ISQLFNA
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