Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4954 |
Symbol | |
ID | 3370506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5871865 |
End bp | 5873367 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637655323 |
Product | hypothetical protein |
Protein accession | YP_238019 |
Protein GI | 66048178 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA AGCAACCCGT GACTCAGCAG GACAGCGCTC TGGTTGAAGT GGAAAACTTC GCCCCGCAAT CTTCCTTGCT CGACAGCATC ATTTCCGAAA GCCGCGTTGC ACGCTCCGAA ACCGAGCGCA CCCGTACCCG CGATCTGATC GGCGAACTGG TGGCCCAGGT ACTTGAAGGC GAGATGACGC CGAGCAAGGA CCTGATTGCC GTGCTCGACG CGCGCATCGC CGAGATCGAT TCGATGCTCT CCGAGCAAAT GAACGAAATC ATGCACGCCC GTGAATTCCA GCAGCTGGAA GCATCCTGGC GCGGCCTGAA GTATCAGGTT GACCAGACCG AGACCAGCAC CACGCTGAAG ATCCACCTGC TCAACGCGTC GAAAAAAGAC CTCGTGCGTG ACCTCAAGGC ATCGTCCGAA TTCGACCAGA GCGCACTGTT CAAGAAGATC TACGAAGAAG AGTACGGCAC CTTCGGTGGT GCGCCGTTCG GCATGCTGCT GGGTGACTAC GAGTTCAACC GCAGCCCGGA AGACATGTAC CTGCTGGAAG AGATCTCCCA CGTGGCAGCT GCCGCCCACG CGCCGTTCAT TTCGGCTGCA TCGGCTGAAC TGTTCGGCTG GGACTCGTTC ACCGACATGG CCGGCCCTCG CGACCTGGCG AAGATCTTCG ACACCGTCGA ATACGCCAAG TGGAAGTCGT TCCGCGCCTC CGAAGACTCC CGCTATGTCG GCCTGACCCT GCCGCACGTG CTGGGTCGCC TGCCGTATGG CCCGGATACC ACGCCTGTCG AAGAATTCAA CTTCGTCGAA AGCGTCGATG GCCGTGACCA CAACAAATAC CTGTGGATGA ACGCTGCCTA CGCGCTGGGC ACTCGTGTGA CCGACGCATT CTCCCGCTAC GGCTGGTGCG TGGCGATCCG TGGTGTGGAA GGCGGTGGTC TGGTCGAAGG CCTGCCGACT CATACCTTCA AGACCGATGA CGGTGAAATC GCGCTCAAAT GCCCGACTGA AATCGCCATC ACCGACCGTC GCGAAAAAGA GCTCTCGGAC CTCGGCTTCA TTCCGCTGGT GCACTGCAAA GGTACCGACT ACGCCGCGTT CTTCGGCACC CAGTCGACCC AGAAGCAGAA GCAGTACAAC ACCGACATTG CCAACGCCAA CGCACGTCTG TCGGCGCAGC TGCAATACAT CTTCGCGACC TCGCGTATCG CTCACTACAT GAAAGCGATC ATGCGCGACA AGATCGGCAG TTTTGCATCG CGCAAGGATG TCGAGCTGTT CCTCAACAAG TGGCTGTCCA GCTACGTGTT GCTGGATGAC ACCGCCAGCC AGGAAGCCAA GGCCAAGTTC CCGCTGCGCG AGGCGCGTGC CGAAGTGTTC GAAGTCCCTG GCAAGCCTGG CGTCTACAAG GCCGTGACTT ACCTGCGTCC GCATTACCAA CTGGATGAAC TGACGGCATC GCTGCGTCTG GTCGCCGAAT TGCCGCAATC GACACGCGGC TAA
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Protein sequence | MTDKQPVTQQ DSALVEVENF APQSSLLDSI ISESRVARSE TERTRTRDLI GELVAQVLEG EMTPSKDLIA VLDARIAEID SMLSEQMNEI MHAREFQQLE ASWRGLKYQV DQTETSTTLK IHLLNASKKD LVRDLKASSE FDQSALFKKI YEEEYGTFGG APFGMLLGDY EFNRSPEDMY LLEEISHVAA AAHAPFISAA SAELFGWDSF TDMAGPRDLA KIFDTVEYAK WKSFRASEDS RYVGLTLPHV LGRLPYGPDT TPVEEFNFVE SVDGRDHNKY LWMNAAYALG TRVTDAFSRY GWCVAIRGVE GGGLVEGLPT HTFKTDDGEI ALKCPTEIAI TDRREKELSD LGFIPLVHCK GTDYAAFFGT QSTQKQKQYN TDIANANARL SAQLQYIFAT SRIAHYMKAI MRDKIGSFAS RKDVELFLNK WLSSYVLLDD TASQEAKAKF PLREARAEVF EVPGKPGVYK AVTYLRPHYQ LDELTASLRL VAELPQSTRG
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