| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4946 |
|---|
| Symbol | |
|---|
| ID | 3370498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5860973 |
|---|
| End bp | 5863309 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655315 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_238011 |
|---|
| Protein GI | 66048170 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACTC ATCATCAAGC CGACAAGACA CCAACCCCCC GCTACAAGCC GTACAAAGGT
GCGGCAGGCG GATGGGGCGC ACTGATCAGC GTGACGCAAC ACTGGCTGGG CAGTGACAAC
GCGCTGAAGA ACCTGCGCAT GATGCTCAAG ACCAACCAGA ACGGCGGTTT CGACTGCCCG
GGCTGCGCGT GGGGCGACTC GCCGGAAAGC GGCATGGTCA AGTTCTGCGA AAACGGCGCC
AAGGCGGTGA ACTGGGAAGC GACCAAGCGT CGTGTGGACC CGGCCTTCTT CGCCCGCTAC
AGCGTCAGCT CGCTGATGGA GCAGAGCGAT TACTGGCTCG AGTATCAGGG CCGTCTGACC
GAGCCGATGA GCTATGACGC GGAAACCGAC CGTTACAAGC CGATCAGTTG GGACAGCGCG
TTTGCGCTGA TCGCCAAGCA CCTGAAGAAC CTGCCCAGCC CGAACATGGC CGAGTTCTAC
ACCTCGGGTC GCGCCAGCAA CGAAGCGGCA TACCTGTATC AGCTGTTCGT GCGCGCCTAC
GGCACCAACA ACTTCCCGGA CTGCTCGAAC ATGTGCCACG AGGCCAGTGG CGTAGCGCTG
TCGCAAAGCG TCGGCGTGGG CAAGGGCACC GTGACCTTCG AGGATTTCGA ACACGCCGAT
GCCATCTTCG TCCTCGGTCA GAACCCCGGC ACCAACCACC CGCGCATGCT CGAACCACTG
CGTGAAGCGG TACAGCGCGG CGCCCAGGTG GTTTGCGTCA ACCCGCTCAA AGAGCGTGGC
CTGGAGCGTT TCCAGCACCC GCAACACCCG GTCGAGATGC TCACCAACGG CGACCGCCCG
ACCAACACCG CCTACTTCCG CCCTGCCCTG GGTGGCGACA TGGCGCTGTT GCGCGGCATG
GCCAAGTTCC TGCTGCAATG GGAGCGCGAG GCGCAGGCCA ACAACGCCCC TTCGGTGTTC
GATCATGCGT TCCTCAACGA ACACACCGAA GGCGTACTCG AATACCTGGC CGCCATCGAT
GACACGTCCT GGGACGCCAT CGTTGAGCAA TCCGGCCTGC CGCTGAGCGA CATCGAACAA
TCGGCACGCA TGTACGCCAA GGGCAAGAAC GTGATCATGT GCTGGGCGAT GGGTATCACC
CAGCACCGTC ACTCGGTGCC GACCATCCAG GAAATTGCCA ACCTGATGCT GCTGCGCGGC
AACATCGGTC GTCCGGGTGC CGGTCTGTGC CCGGTGCGCG GTCACAGTAA CGTGCAGGGC
GACCGCACCA TGGGCATCAA CGAACGCCCA CCGGTGTTCC TGCTCGATGC GCTGGAAAAA
CGCTTCCAGT TCAAAGTGCC CCGCGAAAAC GGCCACAACG TCGTCGAAGC CATTCACGCC
ATGGCCGAAG GCCGCGCCAA GGTGTTCATT GCGCTGGGCG GCAACTTCGC TCAGGCCACC
CCGGACAGCC ATCGCACTGC CGAAGCGCTC AGCAAATGCG ATCTGACCGT ACAGATCAGC
ACCAAGCTGA ACCGCAGCCA CCTGTTCCAC GGCAAGGACG CGCTGATCCT GCCGTGCTTC
GGCCGTACCG ACATCGATAT CCAGGCCAAC GGCCCACAAG CCGTCACCGT GGAAGATTCG
TTCAGCATGG TTCACGCTTC CAACGGTCAG TTGAAGCCGT CGTCGAAGCA AATGCGTTCC
GAGCCTGCGA TCATCGCCGG TATCGCCAAC GCAACGCTGG GCAAGACGCC TGTCGACTGG
CTGTGGCTGG TCGAGGACTA CAACCGTATT CGTGACCTGA TCGCCGACAC CATCCCCGGC
TTCAAGGATT TCAACGAGCG CGTCAAGCAC CCGGGCGGCT TCTACCTGGG TAACGCTGCT
GGCGCACGCC GCTGGAACAC TGCGTCGACC CGCGCCAACT TCAAGTCCAA CGCGCTGCCG
TTGACTCTGA TCAATGAACA CGTCAGCTCG ACCGGGCAGA TCCCGGACCT GATCATGCAG
TCGATGCGCT CGCACGATCA GTACAACACC ACCATCTATG GCCTGGACGA CCGTTATCGC
GGCGTCAAAG GTCAGCGTGA CGTGCTGTTC GTCAACGAAG CCGACATCAT CCGCCTGGGC
TTCCAGCCGG GGCAGAAGGC GGACCTGATT TCGATCTGGA GTGATAACCG CGAGCGCCGC
GTCAAAGGCT TCACGTTGTT GCCGTTCGAT ATTCCGGCCG GTCAGGCTGC CGCCTACTAC
CCGGAGGTCA ACCCGCTGGT GCCGCTGGAA AGCGTGGGCG ATGGCAGCAG CACGCCGACA
TCGAAGTTCG TTGCCATCCG CCTCGAGCGC TCGGCAGAGT CGGCACGCAT CCTCTGA
|
|---|
| Protein sequence | MSTHHQADKT PTPRYKPYKG AAGGWGALIS VTQHWLGSDN ALKNLRMMLK TNQNGGFDCP
GCAWGDSPES GMVKFCENGA KAVNWEATKR RVDPAFFARY SVSSLMEQSD YWLEYQGRLT
EPMSYDAETD RYKPISWDSA FALIAKHLKN LPSPNMAEFY TSGRASNEAA YLYQLFVRAY
GTNNFPDCSN MCHEASGVAL SQSVGVGKGT VTFEDFEHAD AIFVLGQNPG TNHPRMLEPL
REAVQRGAQV VCVNPLKERG LERFQHPQHP VEMLTNGDRP TNTAYFRPAL GGDMALLRGM
AKFLLQWERE AQANNAPSVF DHAFLNEHTE GVLEYLAAID DTSWDAIVEQ SGLPLSDIEQ
SARMYAKGKN VIMCWAMGIT QHRHSVPTIQ EIANLMLLRG NIGRPGAGLC PVRGHSNVQG
DRTMGINERP PVFLLDALEK RFQFKVPREN GHNVVEAIHA MAEGRAKVFI ALGGNFAQAT
PDSHRTAEAL SKCDLTVQIS TKLNRSHLFH GKDALILPCF GRTDIDIQAN GPQAVTVEDS
FSMVHASNGQ LKPSSKQMRS EPAIIAGIAN ATLGKTPVDW LWLVEDYNRI RDLIADTIPG
FKDFNERVKH PGGFYLGNAA GARRWNTAST RANFKSNALP LTLINEHVSS TGQIPDLIMQ
SMRSHDQYNT TIYGLDDRYR GVKGQRDVLF VNEADIIRLG FQPGQKADLI SIWSDNRERR
VKGFTLLPFD IPAGQAAAYY PEVNPLVPLE SVGDGSSTPT SKFVAIRLER SAESARIL
|
|---|
| |