| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4937 |
|---|
| Symbol | |
|---|
| ID | 3370489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5852145 |
|---|
| End bp | 5853959 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637655306 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_238002 |
|---|
| Protein GI | 66048161 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA CTCCCGCTCT GCCGCCCCGC CCTCGCTGGC GCAGCCTTGC CCTTCTGGCA
CTCTGCCTGG CGCCGTTGCT GTGGCCGCTG GAGCATCTGG CCGAACGTTA TTACCGCAAC
GTGCTGGCCA ATCAGAACCG CCAGACCCTG GACCTGTACG TCGCCAACCT GCTGGGCACC
CTGCACCGTT ACGAAACCCT GCCGCAGATC CTCGGCGACC TGCCGGCCTT GCGCGCCGCA
CTGGCGGCAC CGGGCGACAC ACCTACCCTG GTAAACGCCA ACCGTCTGCT CAGCGAAATC
ACGCGTCAGA CCGGTGCCGA TGTCATGTAC CTGATGGACG CAAACGGCCT GACCCTGGCG
GCCTCCAACT CGGATCACAA GGACAGTTTC ATTGGCCGAA ACTTCTCGTT CAGGCCCTAT
TTCATCGATG CGCGGGCGGG CAGAACCGGG CGGTTCTTCG GCCTCGGCAC GACCTCTGCC
AAACGTGGCT ACTTTTTCGC CGGCCCGGTG CGTGACGGTG AGCGAATCAT CGGCGTGCTG
GTGGTCAAGG TCGATCTGGA CCACACCGAA ACCCTGTGGG GCAAGACGCC CGAGCAACTG
CTGCTGACCG ACCAGAACGG CGTGGTGATT CTGACCTCCA ACCCCGAATG GCGTTTTCGG
GCGACCCGCG ACCTGACCGA TGACGAGAAA AAAGCCATCG TCGCGATCCA GTCCTACCCG
ACCCGCGATC CGCGCCCGTT GAGGATCGAT GAAAACGCCT GGCTGACCCA GACCCAGGCC
ATCGAAGAGA CCGGCTGGAA CGTCAACATC CTCGCGCCTC GCGCCCTTGT CGACCGTCAG
GTGCGCACGG TGGTGGCGAT TGGCGGCGCA GCGCTGCTGG TGCTGATGTT GTTGCTGGGC
CTGATGATGC AGCGTCGTCG TCATTATCTG GACCGCATCG CTTTCGAGGC CAAGGCGCGC
CGCGAGCTGG AGATGCGGGT TATCGAGCGG ACCAGCGATC TGGAGGGGCT CAACAGCCGT
CTGCGCCAAG AAGTGCTGGA GCGCGAGCAG GCGCAGCAGG AACTGGTGCA GGCTCAGGAC
GAACTGGTGC AGACCAGCAA ACTGACGGCG CTGGGCACCA TGTCGGCGAG TATCAGCCAT
GAGCTGAATC AGCCGTTGGC CGCTATCCGC AGTTACGCCG AAAACGCCGA AGTGCTGCTC
GATCATCAGC GCACCGAGGA CGCCCGCGGC AACCTCAAGC TGATCAGCGA ACTGACCGGG
CGCATGGCCT CGATCATCGC GCACTTGCGC GCCTTCGCCC GTCGCGACCG CCACGCCCCT
GAAAGCGTGG CACTGCAACC GGCGCTGGAA GATGCGCTGG CGCTGCTGGC CAAACGGCGG
CGCGCCATGG AAGTCGAACT GATCCGTGAC CTGCCGGACG CCACGATCTG GGTGCAGGCC
GGTGAAACCC GTCTGCGTCA GGTGCTCGGC AATCTGATCG CCAACGCGCT GGACGCCCTC
ACTGAAAAAG GCCCGCCGCG CCGGCTGTGG ATAAGTGTCG AGCAAACCGC CGAGGGCGTT
AACCTGTACA TTCGTGACAA CGGCCCCGGC TTTTCCCAGG AAGCACTGGC GCGGGCCCGC
GAGCCCTTCT TCACGACCAA GACCCGCACC CAGGGCCTTG GCCTCGGTCT GGCTATCTGC
GATACGCTGA TGCGCGCGCT GGGCGGCGAA TTGCTGTTCG CCAACCATCC CAGCGGCGGT
GCGCTGCTGA CCCTGCGCCT GCGTGCCGGG GCTTCCGGGG CCAATCTTCA ACCGCCAGAG
GACCTTTCTG CATGA
|
|---|
| Protein sequence | MTMTPALPPR PRWRSLALLA LCLAPLLWPL EHLAERYYRN VLANQNRQTL DLYVANLLGT
LHRYETLPQI LGDLPALRAA LAAPGDTPTL VNANRLLSEI TRQTGADVMY LMDANGLTLA
ASNSDHKDSF IGRNFSFRPY FIDARAGRTG RFFGLGTTSA KRGYFFAGPV RDGERIIGVL
VVKVDLDHTE TLWGKTPEQL LLTDQNGVVI LTSNPEWRFR ATRDLTDDEK KAIVAIQSYP
TRDPRPLRID ENAWLTQTQA IEETGWNVNI LAPRALVDRQ VRTVVAIGGA ALLVLMLLLG
LMMQRRRHYL DRIAFEAKAR RELEMRVIER TSDLEGLNSR LRQEVLEREQ AQQELVQAQD
ELVQTSKLTA LGTMSASISH ELNQPLAAIR SYAENAEVLL DHQRTEDARG NLKLISELTG
RMASIIAHLR AFARRDRHAP ESVALQPALE DALALLAKRR RAMEVELIRD LPDATIWVQA
GETRLRQVLG NLIANALDAL TEKGPPRRLW ISVEQTAEGV NLYIRDNGPG FSQEALARAR
EPFFTTKTRT QGLGLGLAIC DTLMRALGGE LLFANHPSGG ALLTLRLRAG ASGANLQPPE
DLSA
|
|---|
| |