| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4932 |
|---|
| Symbol | |
|---|
| ID | 3370484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5844785 |
|---|
| End bp | 5845891 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637655301 |
|---|
| Product | agmatine deiminase |
|---|
| Protein accession | YP_237997 |
|---|
| Protein GI | 66048156 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03380] agmatine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.803102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TCAATAGCAC GCCACGCGCC GACGGTTTCC ACATGCCGGC CGAATGGGCA
CCGCAAACCC AGGTCTGGAT GGTCTGGCCC GAGCGCCCGG ACAACTGGCG CCTGGGTGGC
AAGCCCGCCC AGGCTGCCCA CGTCGCCATC GCCAAGGCCA TCGCCCGCTT TGAGCCGGTC
ACGGTGGCTG TGTCGGCTGC ACAATACGAC AACGCCCGTG CGCGGCTGGA CATGCCGAAC
ATCCGGGTTG TGGAAATGAG CAGCAACGAT GCCTGGGTGC GCGACAGCGG GCCGACCTTC
GTCATCAACG ACCGTGGCGA AGTGCGCGGC GTGAACTGGG AATTCAATGC CTGGGGCGGC
TTCGACGGCG GCCTGTATGC GCCGTGGAAT CTCGATTCGC AACTGGGCGG CAAAGTACTC
GAAATCGAGC GCTGCCCGCG TTACGTCACC GAAGGCTTCG TTCTCGAAGG CGGCTCGATC
CACGTGGATG GCGAGGGCAC GCTGATCACC ACCGAAGAGT GCCTGCTCAA TCGCAACCGC
AACCCGCACC TGACCCGCGA ACAGATCGAA ACGATCCTCG GCGATTACCT GGCTGTGGAT
AAAGTCATCT GGTTGCCGGA AGGCCTGTTC AACGACGAAA CCGACGGGCA TGTGGATAAC
TTCTGCTGCT ACATCCGTCC GGGCGAGGTG TTACTGGCCT GGACCGATGA TCCCGAAGAC
CCCAACTACT CACGCTGCCA CGCGGCATTG AGTATTTTGG AAAACACCCT GGATGCCAAG
GGTCGTGCGT TTATCGTGCA TAAAATGCCG ATTCCCGGCC CATTGTTCGC CACGGAAGAA
GAATGCGCAG GCGTCGATCA GGTGCATGGC AGCCAGGAGC GCAACCCTTC GGTGCGCCTG
GCCGGGTCGT ATGTGAATTT TCTGATCGTC AACGGCGGCA TCATTGCGCC GAGTTTCGAC
GATCCGATGG ACGAAAAGGC CCGTGAGATC CTGCAAAAGC TGTTTCCAGA GCATGAGGTG
GTGATGGCGC CGGGCCGTGA ATTGCTGCTA GGTGGGGGCA ATATCCACTG CCTGACACAG
CAACAGCCAG CCCCTCACAA GAACTAG
|
|---|
| Protein sequence | MTTLNSTPRA DGFHMPAEWA PQTQVWMVWP ERPDNWRLGG KPAQAAHVAI AKAIARFEPV
TVAVSAAQYD NARARLDMPN IRVVEMSSND AWVRDSGPTF VINDRGEVRG VNWEFNAWGG
FDGGLYAPWN LDSQLGGKVL EIERCPRYVT EGFVLEGGSI HVDGEGTLIT TEECLLNRNR
NPHLTREQIE TILGDYLAVD KVIWLPEGLF NDETDGHVDN FCCYIRPGEV LLAWTDDPED
PNYSRCHAAL SILENTLDAK GRAFIVHKMP IPGPLFATEE ECAGVDQVHG SQERNPSVRL
AGSYVNFLIV NGGIIAPSFD DPMDEKAREI LQKLFPEHEV VMAPGRELLL GGGNIHCLTQ
QQPAPHKN
|
|---|
| |