Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4896 |
Symbol | hisH |
ID | 3370446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5807718 |
End bp | 5808356 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655263 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_237961 |
Protein GI | 66048120 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAG TTGCGGTCAT CGATTACGGC ATGGGCAACC TGCACTCTGT CGCCAAGGCG CTGGAGCATG TGGGCGCAGG CCGTGTGCTG ATTACCAGTG ACGCCAAGGT GATTCGCGAA GCCGATCGCA TCGTCTTTCC GGGTGTGGGC GCGATTCGCG ACTGCATGGC CGAGATTCGC CGTCTGGGCT TTGATTCGCT GGTTCAGGAA GTGAGCCAGG ACCGTCCGTT TCTGGGTATC TGCGTCGGCA TGCAGGCGTT GCTCGACAGC AGCGAAGAGA ACGGCGGCGT GGACTGCATC GGCATGTTTC CCGGCCAGGT AAAGTTCTTC GGCAAGGACC TGCATGAAGA GGGCGAGCAC CTGAAAGTGC CGCACATGGG CTGGAACCAG GTCGCTCAGG CGGTGGATCA CCCGCTGTGG CATGACATTC CGGATCAGGC GCGTTTCTAC TTCGTGCACA GTTTCTATAT CGATGCCGCC AATCAGCGTC AGGTGGTCGG GCGTGGCCAC TACGGCCTCG ACTTCGCCGC TGCGCTGGCC GACGGTTCGC GCTTCGCCGT GCAATTCCAC CCTGAAAAGA GCCATACCCA CGGCCTGCAG TTGCTGCAGA ACTTCGCCGC CTGGGATGGT CGCTGGTAA
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Protein sequence | MQTVAVIDYG MGNLHSVAKA LEHVGAGRVL ITSDAKVIRE ADRIVFPGVG AIRDCMAEIR RLGFDSLVQE VSQDRPFLGI CVGMQALLDS SEENGGVDCI GMFPGQVKFF GKDLHEEGEH LKVPHMGWNQ VAQAVDHPLW HDIPDQARFY FVHSFYIDAA NQRQVVGRGH YGLDFAAALA DGSRFAVQFH PEKSHTHGLQ LLQNFAAWDG RW
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