| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4892 |
|---|
| Symbol | |
|---|
| ID | 3370442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5804227 |
|---|
| End bp | 5805762 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637655259 |
|---|
| Product | trypsin domain-containing protein |
|---|
| Protein accession | YP_237957 |
|---|
| Protein GI | 66048116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTC AAAGACGGGT TTTTCTGGCT GTACTTGCGG TCTCGATGAC GAACGTCGCG
TCTGCACAAC ACATCGACTA CGGCCAGGGA ATGGCATCCT TCACACCCTC TTTGCTGCTG
GAGAACGAGG ATGGCAGGTT TGATCACTGG AATGGCATAG GCCGTATGGA AAGTCGGGGA
AACCGCATGT GCACTGCAGT GCTCATCGAT TCTCGTGGCA ACCCTCAGGT CGACAGCCCT
GATGTACCCG CCTACGTATT GAGCAGTGGC CATTGCACTT ACACCCAGCC AGGCCAGTTG
GGTGTTGATC TGGAAATAGA GGGCCATGTC GAATTCAATT ATTTCAAGGG CATGTCCAGA
AATCGCAAGA GCTATGCGCT GAAGAGAATC AAATGGAGCA GCCTGCGCGG TACAGACCTC
GCTCTGCTGG AACTGGACAC AACGTTGTCC CGCTTGTTCA AGGACGGCAT TAAACCGCTG
GCACTGGCGC AACAGGCGCC TACCGTCGGC ATGGACGTGC TGTCTGTCAG CGCCCCTCTG
ACAGCCGCCG GCTATACGCT GCGTTTGTCC GCCTGCAAAC TGGAATCGGT GGTAAACATC
GTCGAACACC CTTACGCCTG GAATGCCAAC CTGAGCAATC GATGCGAAGA CGTGTTACCG
GGAAGCTCGG GCAGCCCCCT CGTAGACCGC TATACAAACA GAATCATCGG CATCATGGGC
ACCACCACCC GAGGTGCTGC GGAGCAAAGC CGTTGCTTCA CCGACTCGCC GTGCGAGGTC
AATGACGGAC AGGCTTCGTG GCGTGTCGAT ACCAACTATG CAAGCCCGAT AGACTCGCTG
TCTGCCTGCT TTGCCGACGG GGTTTTCGAC ATTAACCGCC CCGCGTGCAC GCTACAATCC
GCGGCGCAAC TGACGCTGGC AAATCCGGAC TATCGCAAGC ACTACATCCG GCTCGAACGC
GATAAGAACG GGGACGTGAT TGCCCCACGC TGGAACATGG CGTTCACCGT CAATACCTCG
ATGTTCAAGT TCAAGGCCAC GCGTAATCCC GCTGAGTGTC GCGAACCGGA CGGTTATAAA
AGCTCCAGAG ATGCCCGTAC CGCGCATATC AATGCTGTTA TCGGCACAGA GCCCGGCATT
TATTCGCTGT GCATTGCGGG CCACAATGGT AATCAGGGGG CAGCACCGGG TGTCAGGGAA
AATGCGTTCA TCCATACCGT CGAACTGGTC GAGGCAGATC AAACGCCTGC TCCCCATGTA
AACATCGAAC GGCTGGATAA CGGCAAGCAC CAGATAAACT TCATTTCTGG CTTGCCGACA
CACGCCAATC ACGCCTACAA ATTCGGCGCC CCCGAACTCA CGGATTGCGC CGATTTATCA
GGCTACAAAT CGGTTTATTA CAACTTCAGC ATCAGCCCGA AACTGCTTCC GATCAAGCTC
TGCACGATGG CCAGGGACGA AGCGGGTCAT CCGTCCGCAC CGCGCACGGA CCTGCTACAG
GAACAGGCGT CAGAAAAACA GGCTTCGGAA GGCTGA
|
|---|
| Protein sequence | MDIQRRVFLA VLAVSMTNVA SAQHIDYGQG MASFTPSLLL ENEDGRFDHW NGIGRMESRG
NRMCTAVLID SRGNPQVDSP DVPAYVLSSG HCTYTQPGQL GVDLEIEGHV EFNYFKGMSR
NRKSYALKRI KWSSLRGTDL ALLELDTTLS RLFKDGIKPL ALAQQAPTVG MDVLSVSAPL
TAAGYTLRLS ACKLESVVNI VEHPYAWNAN LSNRCEDVLP GSSGSPLVDR YTNRIIGIMG
TTTRGAAEQS RCFTDSPCEV NDGQASWRVD TNYASPIDSL SACFADGVFD INRPACTLQS
AAQLTLANPD YRKHYIRLER DKNGDVIAPR WNMAFTVNTS MFKFKATRNP AECREPDGYK
SSRDARTAHI NAVIGTEPGI YSLCIAGHNG NQGAAPGVRE NAFIHTVELV EADQTPAPHV
NIERLDNGKH QINFISGLPT HANHAYKFGA PELTDCADLS GYKSVYYNFS ISPKLLPIKL
CTMARDEAGH PSAPRTDLLQ EQASEKQASE G
|
|---|
| |