| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4885 |
|---|
| Symbol | |
|---|
| ID | 3370435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5794250 |
|---|
| End bp | 5795839 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637655252 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_237950 |
|---|
| Protein GI | 66048109 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCC CTTGTACTTT GTTCATCTCT TTATCCAATC AGCATCGAGT GGGTTCTATG
ACTGCCACGC CAAAACCTCT GGTTCTTATC ATCCTGGATG GCTTCGGACA CAGCGAAAGC
CACAAGGGCA ATGCCATTCT GGCCGCGAAG ATGCCGGTCA TGGATCGTCT CTACCAAACC
ATGCCCAATG GCCTGATTTC CGGGTCGGGC ATGGACGTCG GTCTGCCGGA CGGGCAGATG
GGCAATTCCG AGGTCGGGCA CATGAACCTG GGTGCCGGCC GCGTGGTGTA TCAGGACTTC
ACTCGGGTGA CCAAAGCGAT TCGCGATGGC GAGTTCTTCG AAAACCCGAC CATCTGCGCC
GCTGTGGATA AAGCTGTCAG CGCCGGCAAG GCCGTGCACA TCATGGGCCT GCTGTCCGAT
GGCGGCGTAC ACAGCCACCA GGACCATCTG GTTGCGATGG CAGAACTGGC GGTCAAACGC
GGTGCAGAAA AAATCTACCT GCACGCCTTC CTTGATGGCC GCGACACACC ACCGCGCAGC
GCGAAGAAAT CCCTCGAGCT GATGGACGCA ACCTTTGCCC GTCTGGGCAA GGGTCGCACT
GCCACGATCG TCGGCCGCTA CTTCGCCATG GACCGTGACA ATCGCTGGGA CCGGGTTTCC
TCTGCCTATA ACCTGATCGT CGACAGCACC GCCGATTTCC ACGCCGACAG CGCCGTTGCC
GGGCTCGAAG CCGCCTACGC ACGCGACGAG AACGACGAGT TCGTCAAGGC CACCCGCATT
GGCGAAGCCG CCCGCGTTGA AGATGGCGAC GCGGTGGTGT TCATGAACTT CCGTGCCGAC
CGAGCTCGTG AACTGACTCG TGTGTTCGTC GAAGACGATT TCAAGGACTT CGAGCGCGCC
CGTCAGCCGA AGGTCAACTA CGTGATGCTG ACCCAGTACG CGGCGAGCAT TCCTGCGCCG
TCCGCTTTTG CTGCGGGCAG CCTGAAAAAC GTGCTGGGCG AGTACCTGGC GGACAACGGC
AAGACCCAGC TGCGCATCGC TGAAACCGAA AAATACGCCC ACGTCACCTT CTTCTTCTCC
GGCGGCCGAG AAGAACCGTT CCCGGGTGAA GAGCGCATTC TGATCCCGTC GCCGAAAGTC
GCCACTTACG ACCTGCAGCC GGAGATGAGC GCACCGGAAG TGACCGACAA AATTGTCGAT
GCCATCGAAC ATCAGCGTTA TGACGTGATC GTCGTCAACT ACGCCAACGG CGACATGGTT
GGCCACAGCG GGATCATGGA AGCCGCGATC AAGGCTGTGG AATGCCTGGA CGTGTGTGTC
GGGCGCATCG CCGAGGCGCT GGAGAAAGTC GGTGGTGAGG CGCTGATTAC CGCTGACCAC
GGCAACGTCG AGCAGATGAC CGACGACTCC ACCGGACAGG CGCACACTGC GCATACCTCC
GAGCCGGTGC CGTTCGTTTA TGTCGGCAAA CGTCAGCTGA AAGTTCGCCA AGGCGGCGTT
CTGGCCGATG TCGCGCCGAC CATGCTGCAC CTGCTGGGCA TGGAGAAACC GCAAGAGATG
ACTGGTCACT CGATCCTCGT GGCCGAGTAA
|
|---|
| Protein sequence | MPFPCTLFIS LSNQHRVGSM TATPKPLVLI ILDGFGHSES HKGNAILAAK MPVMDRLYQT
MPNGLISGSG MDVGLPDGQM GNSEVGHMNL GAGRVVYQDF TRVTKAIRDG EFFENPTICA
AVDKAVSAGK AVHIMGLLSD GGVHSHQDHL VAMAELAVKR GAEKIYLHAF LDGRDTPPRS
AKKSLELMDA TFARLGKGRT ATIVGRYFAM DRDNRWDRVS SAYNLIVDST ADFHADSAVA
GLEAAYARDE NDEFVKATRI GEAARVEDGD AVVFMNFRAD RARELTRVFV EDDFKDFERA
RQPKVNYVML TQYAASIPAP SAFAAGSLKN VLGEYLADNG KTQLRIAETE KYAHVTFFFS
GGREEPFPGE ERILIPSPKV ATYDLQPEMS APEVTDKIVD AIEHQRYDVI VVNYANGDMV
GHSGIMEAAI KAVECLDVCV GRIAEALEKV GGEALITADH GNVEQMTDDS TGQAHTAHTS
EPVPFVYVGK RQLKVRQGGV LADVAPTMLH LLGMEKPQEM TGHSILVAE
|
|---|
| |