| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4846 |
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| Symbol | |
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| ID | 3370396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5752274 |
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| End bp | 5753788 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637655213 |
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| Product | threonine dehydratase |
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| Protein accession | YP_237911 |
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| Protein GI | 66048070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAC AGTACGTCAA GAAAATCCTC ACCTCCCGCG TCTACGACGT TGCCATCGAA
ACGCCGCTGC AAGGCGCTCG CCAGCTGTCC GAACGGCTGG GCAATCAGGT GCTGCTCAAG
CGCGAAGACC TGCAGCCGGT GTTCTCGTTC AAGATTCGTG GCGCGTACAA CAAGCTCGCG
CAATTGCCCG CAGAGCAGAC TGCACGGGGC GTGGTGACGG CCTCGGCGGG CAATCATGCC
CAGGGCCTGG CGCTGGCAGC GCGTGAGCTG GGGATCAAGG CGACCATCGT CATGCCGCGC
ACCACGCCGG AAATCAAGGT CGAAGGCGTG CGCTCGCGGG GTGCCACCGT GGTGCTGCAC
GGCGATTCGT TCCCGGAAGC GTTGGCTTAC TCGCTGAAGC TGGTCGACGA ACAAGGCTTC
GTCTACATCC ATCCGTATGA CGACCCCGAC ACCATCGCCG GGCAAGGCAC TGTGGCGATG
GAGATTCTTC GTCAGCAACC GGGCCAGCTG GATGCGATCT TTGTTCCGGT CGGGGGTGGC
GGTCTGATTG CCGGTATCGC GGCCTACGTG AAATACCTGC GCCCGGAGAT CAAGGTGATC
GGCGTCGAGC CGGACGATTC CAACTGCCTG CAGGCGGCGA TGGCTGCCGG GGAGCGCGTG
GTGTTGAGCC AGGTCGGGCT GTTTGCCGAT GGCGTGGCGG TCGCGCAGAT CGGCCATCAC
ACCTTTGAAG TGTGTCGCCA TTATGTCGAT GAAGTGATCA CCGTCAGCAC GGATGAGATC
TGTGCGGCGA TCAAGGACAT CTATGACGAC ACCCGCTCAA TCACCGAGCC GTCCGGCGCG
CTGGGTGTGG CCGGGATCAA GAAGTATGTC GAGCAGCGCG GCGTCAGCGG TCAGACGCTG
GTGGCGATTG ATTCCGGGGC CAACGTCAAC TTCGACCGTT TGCGTCATGT GGCCGAGCGC
GCCGAACTGG GCGAAGGCCG CGAGGCGATC ATTGCCGTGA CCATCCCCGA GCAACCGGGC
AGCTTCAAGG CGTTCTGCGA GGCCATCGGC AAGCGGCAGA TCACCGAATT CAACTACCGC
TACCACACCG ATCGCGAGGC GCACATCTTC GTCGGCGTGC AGACCCATCC CGAGAACGAT
CCGCGCAGCG CCCTGATCGC CAGCCTGACC GGGCAAGGCT TCCCGGTGCT GGACCTGACC
GACAACGAAC TGGCCAAACT GCACATTCGC CACATGGTCG GCGGGCATGC CGAGCGCGTC
GACGATGAAG TGGTGCTGCG CTTCGAGTTC CCGGAGCGAC CGGGCGCGCT GTTCAACTTC
CTCAACCGCC TGGGCGGGCG CTGGACCATC TCGATGTTCC ACTACCGCAA CCACGGCGCA
GCCGACGGCC GGGTGGTTGC CGGGCTGGTA GTGCCGGAGG AAGAGCGGCA TCTGGTCGGC
GCTGCGCTGG ACGAGATTGG TTACCGGTAC TGGGATGAAA GCGAGAACCC GGCGTACCGG
CTGTTTCTGG GCTGA
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| Protein sequence | MLEQYVKKIL TSRVYDVAIE TPLQGARQLS ERLGNQVLLK REDLQPVFSF KIRGAYNKLA
QLPAEQTARG VVTASAGNHA QGLALAAREL GIKATIVMPR TTPEIKVEGV RSRGATVVLH
GDSFPEALAY SLKLVDEQGF VYIHPYDDPD TIAGQGTVAM EILRQQPGQL DAIFVPVGGG
GLIAGIAAYV KYLRPEIKVI GVEPDDSNCL QAAMAAGERV VLSQVGLFAD GVAVAQIGHH
TFEVCRHYVD EVITVSTDEI CAAIKDIYDD TRSITEPSGA LGVAGIKKYV EQRGVSGQTL
VAIDSGANVN FDRLRHVAER AELGEGREAI IAVTIPEQPG SFKAFCEAIG KRQITEFNYR
YHTDREAHIF VGVQTHPEND PRSALIASLT GQGFPVLDLT DNELAKLHIR HMVGGHAERV
DDEVVLRFEF PERPGALFNF LNRLGGRWTI SMFHYRNHGA ADGRVVAGLV VPEEERHLVG
AALDEIGYRY WDESENPAYR LFLG
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