Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4828 |
Symbol | |
ID | 3370378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5730019 |
End bp | 5731716 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655195 |
Product | urocanate hydratase |
Protein accession | YP_237893 |
Protein GI | 66048052 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGA ATAATCAACA CCTGAAGCAG GACTGGACCC GCCATCGCGA AGGCGTCGTA CGGGCTGCAC GCGGTACTCA ATTGACTGCC AAGAGCTGGC TGACCGAAGC GCCGCTACGC ATGTTGATGA ACAATCTCGA CCCGGAAGTC GCCGAAAACC CCAATGAGCT GGTGGTTTAC GGCGGCATCG GCCGCGCCGC GCGCAACTGG GAGTGCTACG ACAAGATCGT CGAGAGCCTC ACTCAGCTCA ACGATGATGA AACCCTGCTG GTACAGTCCG GCAAGCCGGT CGGCGTGTTC AAGACCCACA GCAACGCCCC TCGCGTATTG ATCGCCAACT CCAACCTGGT ACCGCACTGG GCCAGTTGGG AGCACTTCAA CGAACTGGAT GCCAAGGGCC TGGCCATGTA TGGCCAGATG ACCGCCGGCA GCTGGATCTA CATCGGCAGC CAGGGCATCG TGCAAGGCAC TTACGAAACC TTCGTCGAAG CCGGTCGCCA GCACTATGAC GGCAACCTCA AGGGCCGCTG GGTGCTCACC GCAGGTCTGG GCGGCATGGG TGGCGCGCAG CCGCTGGCCG CGACATTGGC CGGGGCCTGC TCGCTGAACA TAGAATGCCA GCAGAGCCGC ATCGATTTCC GCATCAAGAC CCGCTACGTT GACGAACAGG CCGCAGATCT CGATGACGCA CTGGCGCGTA TCGCCAAATA CACGGCCGAA GGCAAAGCCA TCTCCATCGC GCTGTGTGGC AACGCGGCGG AAATCCTGCC GGAAATGGTC CGTCGCGGTG TGCGCCCGGA CATGGTCACC GACCAGACCA GCGCCCACGA CCCGCTCAAT GGTTACCTGC CCAAAGGCTG GACCTGGGAC GAGTACCGTG CCCGTTCGGT GAGCGAACCG GCCAGTGTGG TCAAGGCCGC CAAGCAGTCG ATGGCCGAGC ACGTCGAAGC CATGCTCGCC TTCCAGCAAG CCGGCATTCC GACCTTCGAC TACGGCAACA ATATTCGTCA GATGGCCAAG GAAGTCGGCG TCACCAATGC CTTCGATTTT CCGGGCTTCG TGCCGGCCTA TATCCGTCCG CTGTTCTGCC GTGGCATCGG GCCGTTCCGC TGGGCCGCGC TGTCGGGCGA CCCGCAGGAC ATCTACAAGA CCGACGCCAA AGTCAAAGAG CTGATCCCGG ACGACGAGCA CCTGCACAAC TGGCTGGACA TGGCCCGCGA GCGCATCAGC TTCCAGGGCC TGCCGGCGCG TATCTGCTGG GTCGGCCTGG GTCAACGCGC CAGACTGGGT CTGGCCTTCA ACGAAATGGT CCGCAGTGGC GAGTTGTCGG CACCGGTGGT GATCGGTCGC GACCACCTGG ACTCCGGCTC GGTCGCCAGC CCCAACCGCG AAACCGAATC CATGCGTGAC GGCTCCGACG CTGTTTCCGA CTGGCCGCTG CTCAATGCTC TGCTCAACAC CGCCAGCGGT GCGACCTGGG TCTCGCTGCA CCACGGTGGC GGCGTCGGCA TGGGCTTCTC GCAGCATTCC GGGATGGTAA TCGTCTGCGA CGGCACGGAC GAAGCCGCCG AGCGTATTGC CCGCGTGCTG CATAACGACC CGGCCACCGG GGTGATGCGC CATGCCGATG CCGGTTACGA CATCGCTATC GACTGTGCCA GAGAGCAGGG CTTGAACCTG CCAATGATCG GACGTTGA
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Protein sequence | MTENNQHLKQ DWTRHREGVV RAARGTQLTA KSWLTEAPLR MLMNNLDPEV AENPNELVVY GGIGRAARNW ECYDKIVESL TQLNDDETLL VQSGKPVGVF KTHSNAPRVL IANSNLVPHW ASWEHFNELD AKGLAMYGQM TAGSWIYIGS QGIVQGTYET FVEAGRQHYD GNLKGRWVLT AGLGGMGGAQ PLAATLAGAC SLNIECQQSR IDFRIKTRYV DEQAADLDDA LARIAKYTAE GKAISIALCG NAAEILPEMV RRGVRPDMVT DQTSAHDPLN GYLPKGWTWD EYRARSVSEP ASVVKAAKQS MAEHVEAMLA FQQAGIPTFD YGNNIRQMAK EVGVTNAFDF PGFVPAYIRP LFCRGIGPFR WAALSGDPQD IYKTDAKVKE LIPDDEHLHN WLDMARERIS FQGLPARICW VGLGQRARLG LAFNEMVRSG ELSAPVVIGR DHLDSGSVAS PNRETESMRD GSDAVSDWPL LNALLNTASG ATWVSLHHGG GVGMGFSQHS GMVIVCDGTD EAAERIARVL HNDPATGVMR HADAGYDIAI DCAREQGLNL PMIGR
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