Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4766 |
Symbol | |
ID | 3370316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5641228 |
End bp | 5642268 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655133 |
Product | threonine aldolase |
Protein accession | YP_237831 |
Protein GI | 66047990 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.168867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGACC AAAGCCAACA GTTCGCCAGC GACAACTATT CCGGTATCTG CCCTGAAGCC TGGGCAGCCA TGGAGCAGGC GAACAAGGGC CATCAACGCG CTTATGGTGA CGATCAATGG ACTGCCCGCG CTTCGGATGA TTTCCGCCGA CTGTTCGAAA CCGACTGCGA AGTGTTTTTC GCCTTCAACG GCACGGCGGC CAACTCGCTG GCACTGTCAT CGCTGTGCCA GAGTTACCAC AGTGTCATCT GTTCGGAAAC GGCTCACGTC GAAACCGATG AATGCGGTGC GCCGGAGTTT TTCTCCAACG GTTCCAAACT GCTGACAGCC CGCAGCGCGG GCGGCAAGCT GACCCCGGAA TCGATTCGTG AAGTGGCGCT CAAGCGTCAG GACATTCACT ACCCCAAGCC GCGCGTCGTG ACCCTCACCC AGGCCACCGA GGTGGGCGGC GTCTATCAGC CGGAAGAACT CAAGGCAATC AGCGCGACCT GCAAGGAACT GGGCCTGCAC CTGCACATGG ACGGTGCCCG CTTCTCCAAT GCCTGCGCCT TTCTGGAGGC TTCCCCGGCT GAACTGACCT GGAAGTCCGG CGTTGACGTG TTGTGCTTCG GCGGCACCAA AAACGGTATG GCGGTGGGCG AAGCGATTCT GTTTTTCGAC CATGATCTGG CTGAAGACTT CGACTATCGC TGCAAGCAGG CCGGGCAACT GGCGTCGAAG ATGCGCTTCC TGTCTGCACC GTGGGTCGGC CTGCTGGAAA ACGACGCCTG GCTCAAACAC GCCCGTCACG CCAACCGCTG TGCGCAACTG CTCGCCGAAC TGGTCAAGGA CATTCCTGGC GTGGAGCTGA TGTTCCCGGT GCAGGCCAAT GGCGTGTTCC TGCAGCTGTC GGAGCCGGCC ATTGCTGCAT TGACCGCCCG CGGCTGGCGC TTCTACACCT TCATCGGCAA CGGCGGCGCC CGTTTCATGT GCTCGTGGGA CACCGAAGAA GACCGCGTGC GTGAACTGGC CGCCGATATC AGGCTGGTGA TGCAGGGCTG A
|
Protein sequence | MTDQSQQFAS DNYSGICPEA WAAMEQANKG HQRAYGDDQW TARASDDFRR LFETDCEVFF AFNGTAANSL ALSSLCQSYH SVICSETAHV ETDECGAPEF FSNGSKLLTA RSAGGKLTPE SIREVALKRQ DIHYPKPRVV TLTQATEVGG VYQPEELKAI SATCKELGLH LHMDGARFSN ACAFLEASPA ELTWKSGVDV LCFGGTKNGM AVGEAILFFD HDLAEDFDYR CKQAGQLASK MRFLSAPWVG LLENDAWLKH ARHANRCAQL LAELVKDIPG VELMFPVQAN GVFLQLSEPA IAALTARGWR FYTFIGNGGA RFMCSWDTEE DRVRELAADI RLVMQG
|
| |