| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4729 |
|---|
| Symbol | |
|---|
| ID | 3370279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5606522 |
|---|
| End bp | 5607655 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655096 |
|---|
| Product | PepSY-associated TM helix |
|---|
| Protein accession | YP_237794 |
|---|
| Protein GI | 66047953 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCC AAACCGTGCG CCGCTGGTCC ATCGTGCATA CCTGGAGCAG CCTGATTTGC
ACCCTGTTCC TGTTGATGCT GGCTGTCACC GGCCTGCCGC TGATCTTTCA TCATGAAATC
GATCATCTGC TCGGCGACGC TCCGCATTAC AAAGAGATGC CTGCCGATAC GCCACGCCTG
GACCTGGAGC AACTGGCCAG GGCTGCCGAA GCGCATCGCC CCGGCGAGGT GATGCAGTAT
TTTGGCTGGG ACGATGAAGA CCCCAATGGC GTCATGGCAA TCACCGCTGC AACCGCCGGC
ACCGAGCCCA ACTCCTCGCA CACCTTCGCC CTCGATGCGC GCACCGGTGA GGCACTGGAG
ATGCCTTCTG CCAACGGCGG CTTCATGATG GTCATGCTGC GCCTGCACGT AGACATGTAC
GCCAATCTGC CCGGCAAACT GTTGCTGGCG TTCATGGGCT TGCTGTTCGT GGTGGCGATC
GTTTCCGGGA CCGTGCTGTA TGCGCCGTTC ATGCGCAAGC TGGAGTTCGG TCAGGTGCGG
GTCAATAAAT CCAGGCGTAC GCGCTGGCTG GACCTGCACA ACCTGATTGG CGTAGTGACA
TTGACCTGGG CGCTGGTGGT CGGCGTGACC GGGGTGATCA GCGCCTGCGC CGATCTGCTG
ATTGCCTCCT GGCGCAACGA TGCGCTGGCC ACCATGATCG CCCCTTACAA GGACGCGCCG
CCATTGACCC AGCGCGCCCC GGCGACTCGA TTGCTGGAAA TTGCCGAATC CGCTGCGCCC
GGCATGCAGG CCGATTTCAT CGCCTTCCCC GGCACGCGCT TCTCCAGCGA GCATCATTAC
GCGGTGTTCC TCAAAGGCAA TACACACCTG ACTGCGCACC TCGCCACACC GGTGCTGATC
GACGCCCAGA CCCTGCACGT CACCGCGGTG GTCGAACGTC CCTGGTACAT GGACGCACTG
GGGATGTCGC AACCGCTGCA TTTCGGCGAT TACGGCGGCA TGCCGATGAA GATCCTCTGG
GCGGTGCTGG ACGTGCTGAC CATCATCGTA CTCGGCAGCG GCGTTTATCT GTGGTGGGTG
AGGCGTCGTG CCGCGCGCTC GGTGAGCGCT GTTCAGGCTC AGGTGGCGCA ATGA
|
|---|
| Protein sequence | MKSQTVRRWS IVHTWSSLIC TLFLLMLAVT GLPLIFHHEI DHLLGDAPHY KEMPADTPRL
DLEQLARAAE AHRPGEVMQY FGWDDEDPNG VMAITAATAG TEPNSSHTFA LDARTGEALE
MPSANGGFMM VMLRLHVDMY ANLPGKLLLA FMGLLFVVAI VSGTVLYAPF MRKLEFGQVR
VNKSRRTRWL DLHNLIGVVT LTWALVVGVT GVISACADLL IASWRNDALA TMIAPYKDAP
PLTQRAPATR LLEIAESAAP GMQADFIAFP GTRFSSEHHY AVFLKGNTHL TAHLATPVLI
DAQTLHVTAV VERPWYMDAL GMSQPLHFGD YGGMPMKILW AVLDVLTIIV LGSGVYLWWV
RRRAARSVSA VQAQVAQ
|
|---|
| |