| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4709 |
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| Symbol | |
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| ID | 3370259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5580137 |
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| End bp | 5581084 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637655076 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_237774 |
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| Protein GI | 66047933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGTT CCAAATCGTT GCTGTTGGCC GCTACGCTCT GTATGCCGGT GCTAGCCCAG
GCAGCCGAGC CAGAGGCCTG TCATACGGTC AACTTCTCCG ATGTCGGCTG GACTGACATT
ACCGTCACTA CTGCGGTAAC CAGCGCCGTA CTCGAGTCAC TGGGTTACAA GACCAAAACC
ACCATGATTT CCGTACCGGT GACCTACAAG TCGCTGGCCG ACGGCAAGAA CATGGACGTG
TTCCTCGGCA ACTGGATGCC GACCATGGAA AACGACATCA AGCCCTATCG CGAAGCAGGG
ACCGTCGAAA CCGTGCGTGC CAACCTGGAG AACGCCAAGT ACACCCTGGC GGTCCCGGAA
GCGCTTTACG ACAAAGGCCT GCATGACTTC GCCGACATCG CCAAATTCAA GAAGGAACTG
GGCGGCAAGA TCTACGGCAT CGAGCCTGGC AACGACGGTA ATCGCCTGAT CCAGAGCATG
ATCGACAAGA ACGCCTTCGG CCTCAAGGAC GCAGGCTTCA AGGTCGTTGA ATCCAGCGAA
GCCGCAATGC TTTCGCAGGT CGACCGCGCC GTGAAACGCA AAAACGATGT GGTATTCCTC
GGTTGGGAAC CGCATCCGAT GAACACCCGC TTCAAGATGA AATATCTGAC TGGCGGCGAT
GACTTCTTCG GCCCCAACTA CGGCCAGGCG ACCATCTACA CCAACACCCG CAAAGGCTAC
AGTCAGGAGT GCAGCAACGT AGGTCAGTTG CTCAAGAACC TGTCCTTCAC GCTGAACATG
GAAAGCACCC TGATGGGCAA CGTGCTGGAC GACAAGATGA AGCCTGATGC CGCCGCCAAG
GCGTGGATCA AGAAAAACCC TCAAGTACTC GACACCTGGC TCGCAGGCGT GAACACCGTC
GATGGCAAGC CAGGCCTGGA GGCAGCCAAA GCCAAGTTGA CCCAGTAA
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| Protein sequence | MKGSKSLLLA ATLCMPVLAQ AAEPEACHTV NFSDVGWTDI TVTTAVTSAV LESLGYKTKT
TMISVPVTYK SLADGKNMDV FLGNWMPTME NDIKPYREAG TVETVRANLE NAKYTLAVPE
ALYDKGLHDF ADIAKFKKEL GGKIYGIEPG NDGNRLIQSM IDKNAFGLKD AGFKVVESSE
AAMLSQVDRA VKRKNDVVFL GWEPHPMNTR FKMKYLTGGD DFFGPNYGQA TIYTNTRKGY
SQECSNVGQL LKNLSFTLNM ESTLMGNVLD DKMKPDAAAK AWIKKNPQVL DTWLAGVNTV
DGKPGLEAAK AKLTQ
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