Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4683 |
Symbol | bioD |
ID | 3370233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5551356 |
End bp | 5552036 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655050 |
Product | dithiobiotin synthetase |
Protein accession | YP_237748 |
Protein GI | 66047907 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.462604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG CCTACTTCAT CACCGGGACC GATACCGACG CTGGCAAGAC CACGGTGGCT GCCGGCTTGC TGCATGCCGC CAGAGCGTCT GGCCTGAGCA CGGCAGCCGG CAAGCCCGTT GCGTCCGGTT GTTTGGTCAC GCCACAGGGG CTGCGCAACC CGGATGCCCT GGCGTTGCTG GCCGAGTGTT CTGTCGAGCT GGATTATGCT GAAGTCAATC CGCTGGCCTT CGAACCGGCC ATTGCTCCGC ACCTGGCAGC ACGCGAAGCC GGCGTCGCGC TGACGGTCGA CTCGGTGCTG CAACCCATGC GGCATATGCT CACCAGACAG GCCGATTTCA CCCTGATCGA AGGGGCAGGC GGCTGGCGCG TGCCGCTGTC CGGGCAGAGC ACGTTGTCCG ATCTGGCCAT TGCCCTGGAT CTACCGGTGA TTCTGGTGGT GGGCGTGCGT CTGGGCTGCA TCAATCATGC GGTGCTGACT GCTGAAGCGA TTGCCCGCGA CGGTTTACGT CTGGCTGGCT GGGTGGCCAA CATCGTGGAT GCCGACACCT CGCGGCTTGA AGAAAACCTC GCCACGCTGG TCGAGCGTCT GCCCGCACCT TGTCTGGGGC GGGTGCCGCG ATTGGATGAG GCAAGTGCCG AAAATGTGGC GCAGTATCTT GATTTGAAGG TGTTGAGCTG A
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Protein sequence | MTAAYFITGT DTDAGKTTVA AGLLHAARAS GLSTAAGKPV ASGCLVTPQG LRNPDALALL AECSVELDYA EVNPLAFEPA IAPHLAAREA GVALTVDSVL QPMRHMLTRQ ADFTLIEGAG GWRVPLSGQS TLSDLAIALD LPVILVVGVR LGCINHAVLT AEAIARDGLR LAGWVANIVD ADTSRLEENL ATLVERLPAP CLGRVPRLDE ASAENVAQYL DLKVLS
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