Gene Psyr_4634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4634 
Symbolcca 
ID3370183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5495417 
End bp5496643 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID637655003 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_237702 
Protein GI66047861 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT ATAAAGTGGG CGGTGCTGTA CGCGACCGTC TTCTGGGTCA ACCTGTCACG 
GACATCGACT GGGTCGTGGT CGGCGCAAGC ACCGAGGACA TGCTGATCAA GGGCTATCGC
CCGGTCGGTA CAGATTTCCC GGTGTTTTTG CATCCGCTGA CCAATGAGGA ATACGCGCTG
GCACGCACCG AGCGCAAGAG CGGCGTGGGC TATGGGGGCT TTGTTTTCCA CGCCAGCCCC
GAGGTGACGC TTGAGCAGGA TTTGATTCGG CGTGACCTGA CCATCAATGC CATGGCTGAA
GACAAGGACG GCAATTTAAC CGATCCCTAC AACGGCCAGA AGGATTTGCA AGCGCGGATA
TTGCGTCACG TTTCACCCGC ATTCGCCGAA GATCCGCTCC GGGTCTTGCG TGTGGCTCGA
TTCGCAGCAC GCTACGCCGG TTACGGTTTT ACCATCGCGC CCGAGACCCT GGGACTGATG
CGACAGCTCA GTGCATCCGG CGAACTCAAG GCGCTGACTG CCGAGCGAAG CTGGAAGGAA
ATCTCGCGCG CGCTCATGGA AGAACAGCCT CAGGTGTTCA TTCAGGTGCT GCACGACTGC
GGCGCGCTCA AAGAGCTGAT GCCCGAGGTC GAAGCTCTTT TTGGTGTACC GCAGCCGGCG
GCGCATCACC CGGAAATAGA CACCGGCGTA CACGTGCTCA GTGTTCTTGA GCAATCCGCA
CGCCACAAAC ACCCGCTGAC GGTGCGCTGG GCCTGCTTGC TGCACGACCT CGGTAAAGGG
CTGACGCCGG AAGCCGAATG GCCAAGGCAC ATCGCTCATG AACACACCGG CCTGCGCCTG
ATAAAAGCGG TCAACGAGCG TTTTCGTGTG CCGAGGGACT GCCAGGAACT GGCGCTGCTG
GTCGGCCAGT ACCATACCCA CGGCCACCGT GCGCTGGAGT TGAAACCTTC GACCCTGCTG
GAGTTGCTGC AAAGCTTCGA CGTCTACCGC CGCCCGCAGC GCTTTGAAGA GTTCATTGCG
GCGTGCGAGA TGGACGCCCG AGGACGTCAC GGCTTCGAAC AACGCAGTTA TCCACAGGCC
GACTACCTGC GCGGCGCCGC CGAGGCCGCA CGCGCGGTAT CAGTACAGCC GTTGCTGGAA
CAGGGTCTGA AGGGCAAGGA ACTGGGTGAC GCGCTGAAGA ACGAGCGCTT GAAGGCACTG
AAAACCTACA AGACCAGCAC TGTGTGA
 
Protein sequence
MQIYKVGGAV RDRLLGQPVT DIDWVVVGAS TEDMLIKGYR PVGTDFPVFL HPLTNEEYAL 
ARTERKSGVG YGGFVFHASP EVTLEQDLIR RDLTINAMAE DKDGNLTDPY NGQKDLQARI
LRHVSPAFAE DPLRVLRVAR FAARYAGYGF TIAPETLGLM RQLSASGELK ALTAERSWKE
ISRALMEEQP QVFIQVLHDC GALKELMPEV EALFGVPQPA AHHPEIDTGV HVLSVLEQSA
RHKHPLTVRW ACLLHDLGKG LTPEAEWPRH IAHEHTGLRL IKAVNERFRV PRDCQELALL
VGQYHTHGHR ALELKPSTLL ELLQSFDVYR RPQRFEEFIA ACEMDARGRH GFEQRSYPQA
DYLRGAAEAA RAVSVQPLLE QGLKGKELGD ALKNERLKAL KTYKTSTV