Gene Psyr_4625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4625 
Symbol 
ID3370174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5485325 
End bp5486653 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content58% 
IMG OID637654994 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_237693 
Protein GI66047852 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTGA AGACCAAGCT TTCTGATTGT CTGCGCCCGC TGATGCTGGG CGCGTTACTC 
CTGAGCGGTG CAGTGCATGC TGCGGTTCAA CCTCTGGACA GTGTCGTGGC CATCGTCGAC
AACGACGTGA TCATGAAAAG CCAGATGGAC CAGCGTGTAC GTGAAGTTCA GCAGACCATT
GCCAAGCGTG GCTCTGGTGT ACCGCCTGCC GAAGCCCTGC AACCACAGGT TCTGGATCGT
CTGATTCTGG AAAACCTGCA GTTGCAGATG GGCGAACGGT CTGGCATTCG AGTCTCCGAC
GAAGAGCTGA ACCAGGCCAT CGGCACCATT GCCCAGCGCA ACAACATGAG CGTGGAGCAG
TTCCGCGCCG CGCTGGCGCA TGACGGCCTG TCCTATAACG ATGCGCGCGA ACAGGTGCGC
CGGGAAATGA TCATCAGCCG CGTGCGTCAG CGCCGGGTGG CCGAACGTAT CCAGGTGTCC
CAGCAGGAAG TGAAGAACTT CCTCGCCTCC GATATGGGCA AGGCTCAGCT GTCTGAAGAG
TTTCACCTGG CCAACATTCT GATCGCCACA CCTGACAGCG CTTCTTCGGA CGCCATCCAG
GCCGCAGCGG TCAAGGCCAA GGGTATCTAC GACCAGCTGA AGAAAGGTGC TGACTTCACC
CGTCTTGCAG CCACCTCCTC GTCCAGCGAA AACGCACTGG AAGGCGGCGA CATGGGCTGG
CGCAAGGCTG CACAGTTGCC ACCACCCTTC GGCGACATGC TCAGCTCGAT GCCGGTCGGT
GACGTAACGC CTCCTGCGCG TACGCCGGGT GGTTTCATCA TTCTCAAGCT GTTGGAAAAG
CGTGGCGGTC AGGGTCAGGC GCAAATGCGT GATGAAGTGC ATGTGCGTCA TATCCTGATC
AAGCCAAGCG AAATCCGTAA TGAGGAAGAG ACCAAGCGTC TTGCCCAGAA GATCTACGAC
CGCATCGAGA ACGGCGAAGA TTTCGCCGAG CTGGCGAAAA GCTTTTCGGA AGATCCGGGT
TCTGCACTCA ATGGCGGCGA TCTGAACTGG GTTGATCCCA ATTCTCTGGT TCCGGAATTC
CGTCAGGTCA TGAGCGAAAC ACCACAAGGC GTCTTGTCCA AACCGTTCCA GACCCAGTAC
GGCTGGCATG TCCTCGAAGT GCTCGGTCGT CGCTCCACGG ACGCTACCGA TCAGGCTCGC
GAACAGCAGG CGCTGAACGT ACTGCGTAAC CGCAAGTACG ACGAAGAGCT GCAAACCTGG
CTGCGTCAGA TCCGCGACGA AGCCTACGTT GAAATCAAAC TCCCTGGCGC GACCCAGGCT
GCACAGTGA
 
Protein sequence
MNVKTKLSDC LRPLMLGALL LSGAVHAAVQ PLDSVVAIVD NDVIMKSQMD QRVREVQQTI 
AKRGSGVPPA EALQPQVLDR LILENLQLQM GERSGIRVSD EELNQAIGTI AQRNNMSVEQ
FRAALAHDGL SYNDAREQVR REMIISRVRQ RRVAERIQVS QQEVKNFLAS DMGKAQLSEE
FHLANILIAT PDSASSDAIQ AAAVKAKGIY DQLKKGADFT RLAATSSSSE NALEGGDMGW
RKAAQLPPPF GDMLSSMPVG DVTPPARTPG GFIILKLLEK RGGQGQAQMR DEVHVRHILI
KPSEIRNEEE TKRLAQKIYD RIENGEDFAE LAKSFSEDPG SALNGGDLNW VDPNSLVPEF
RQVMSETPQG VLSKPFQTQY GWHVLEVLGR RSTDATDQAR EQQALNVLRN RKYDEELQTW
LRQIRDEAYV EIKLPGATQA AQ